Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 104356915 . T A CCDS6759.1:NM_147180.2:c.298Agc>Tgc_NP_671709.1:p.100S>C Homo sapiens protein phosphatase 3, regulatory subunit B, beta (PPP3R2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1mf8 2 P63098 84.71 4e-102 X-RAY
 2002-10-16 ARG B:97 B:96 90.0 0.4 H -73.4 -21.0 90.0 0.4 0.0 CA
 8.140
 O
 CA
4f0z 2 P63098 84.71 4e-102 X-RAY
 2013-03-06 ARG B:97 B:96 108.0 0.48 H -63.6 -27.7 108.0 0.48 0.0 CA
HOH
 7.862
2.682
 HA
HD3
 CA
O
4or9 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 ARG B:97 B:96 101.0 0.449 H -67.8 -25.8 101.0 0.449 0.0 CA
HOH
 8.284
2.763
 O
O
 CA
O
4ora 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 ARG B:97 B:96 98.0 0.436 H -69.2 -24.8 98.0 0.436 0.0 CA
HOH
 8.615
4.794
 O
NE
 CA
O
4orb 2 Q63810 84.71 4e-102 X-RAY
 2015-05-20 ARG B:97 B:96 98.0 0.436 H -66.2 -12.2 98.0 0.436 0.0 CA
 8.774
 O
 CA
4orc 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 ARG B:97 B:96 95.0 0.422 H -77.0 -13.6 95.0 0.422 0.0 CA
HOH
 8.896
7.307
 O
NH1
 CA
O
5sve 2 P63098 84.71 4e-102 X-RAY
 2017-01-11 ARG B:97 B:96 99.0 0.44 H -68.2 -23.0 99.0 0.44 0.0 CA
HOH
 8.318
3.238
 O
NH1
 CA
O
1aui 2 P63098 84.62 4e-101 X-RAY
 1997-12-03 ARG B:96 B:96 89.0 0.396 H -69.0 -12.5 89.0 0.396 0.0 CA
HOH
 8.208
2.761
 O
O
 CA
O
1m63 2 P63098 84.62 4e-101 X-RAY
 2002-09-25 ARG B:96 B:96 73.0 0.324 H -71.8 -8.5 73.0 0.324 0.0 CA
 7.720
 O
 CA
ARG F:96 F:96 78.0 0.347 T -73.2 -1.7 78.0 0.347 0.0 CA
 8.657
 O
 CA
1tco 2 P63099 84.62 4e-101 X-RAY
 1997-02-12 ARG B:96 B:96 96.0 0.427 H -66.8 -19.4 96.0 0.427 0.0 CA
HOH
 8.416
2.748
 O
NH1
 CA
O
4il1 1 P62161,P63100,P63329 84.52 5e-93 X-RAY
 2013-10-02 ARG A:254 A:254 80.0 0.356 H -67.9 -28.5 80.0 0.356 0.0 CA
HOH
 8.467
9.940
 O
N
 CA
O
ARG B:254 B:254 78.0 0.347 H -68.9 -27.5 NA NA NA
ARG C:254 C:254 47.0 0.209 H -68.8 -27.7 NA NA NA
ARG D:254 D:254 56.0 0.249 H -68.7 -27.9 NA NA NA
2p6b 3 P63098 83.87 6e-89 X-RAY
 2007-06-05 ARG C:83 B:96 87.0 0.387 H -59.7 -29.5 87.0 0.387 0.0 CA
HOH
 8.204
2.820
 O
O
 CA
O
ARG E:83 D:96 104.0 0.462 H -63.6 -23.2 104.0 0.462 0.0 CA
HOH
 8.266
3.408
 O
NH1
 CA
O
6nuc 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 ARG B:83 B:97 107.0 0.476 H -67.4 -20.8 107.0 0.476 0.0 CA
HOH
 7.534
2.561
 HA
HE
 CA
O
6nuf 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 ARG B:83 B:97 120.0 0.533 H -68.6 -20.0 120.0 0.533 0.0 CA
HOH
 7.489
2.249
 HA
HE
 CA
O
6nuu 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 ARG B:83 B:97 93.0 0.413 H -69.6 -23.7 93.0 0.413 0.0 CA
HOH
 7.613
2.295
 HA
HD3
 CA
O
3ll8 3 P63098 83.87 7e-89 X-RAY
 2011-01-12 ARG C:82 B:96 101.0 0.449 H -59.4 -31.8 101.0 0.449 0.0 CA
HOH
 8.328
2.660
 O
O
 CA
O
ARG E:82 D:96 97.0 0.431 H -63.9 -25.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96lz3-f1 1 Q96LZ3 100.0 3e-123 SER A:97 A:97 28.0 0.243 H -63.2 -19.4
af-p63098-f1 1 P63098 84.71 2e-102 ARG A:97 A:97 79.0 0.351 H -64.3 -16.7