Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 104357008 . C A CCDS6759.1:NM_147180.2:c.205Ggt>Tgt_NP_671709.1:p.69G>C Homo sapiens protein phosphatase 3, regulatory subunit B, beta (PPP3R2), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1mf8 2 P63098 84.71 4e-102 X-RAY
2002-10-16 GLY B:66 B:65 60.0 0.8 41.6 53.1 60.0 0.8 0.0 CA
4.691
N
CA
4f0z 2 P63098 84.71 4e-102 X-RAY
2013-03-06 GLY B:66 B:65 54.0 0.72 67.6 25.2 54.0 0.72 0.0 CA
HOH
4.128
3.093
H
HA3
CA
O
4or9 2 P63098 84.71 4e-102 X-RAY
2015-05-20 GLY B:66 B:65 57.0 0.76 71.2 29.0 57.0 0.76 0.0 CA
HOH
4.670
2.687
N
O
CA
O
4ora 2 P63098 84.71 4e-102 X-RAY
2015-05-20 GLY B:66 B:65 54.0 0.72 S 99.4 6.3 54.0 0.72 0.0 CA
HOH
4.555
6.549
N
N
CA
O
4orb 2 Q63810 84.71 4e-102 X-RAY
2015-05-20 GLY B:66 B:65 50.0 0.667 66.9 44.6 50.0 0.667 0.0 CA
HOH
4.926
6.552
N
N
CA
O
4orc 2 P63098 84.71 4e-102 X-RAY
2015-05-20 GLY B:66 B:65 57.0 0.76 71.7 17.7 57.0 0.76 0.0 CA
HOH
5.012
9.116
N
N
CA
O
5sve 2 P63098 84.71 4e-102 X-RAY
2017-01-11 GLY B:66 B:65 61.0 0.813 69.3 57.0 61.0 0.813 0.0 CA
HOH
4.844
7.739
N
N
CA
O
1aui 2 P63098 84.62 4e-101 X-RAY
1997-12-03 GLY B:65 B:65 59.0 0.787 55.7 37.8 59.0 0.787 0.0 CA
HOH
4.546
3.894
N
CA
CA
O
1m63 2 P63098 84.62 4e-101 X-RAY
2002-09-25 GLY B:65 B:65 63.0 0.84 77.8 17.6 63.0 0.84 0.0 CA
5.400
N
CA
GLY F:65 F:65 55.0 0.733 80.3 85.4 55.0 0.733 0.0 CA
4.837
N
CA
1tco 2 P63099 84.62 4e-101 X-RAY
1997-02-12 GLY B:65 B:65 53.0 0.707 59.3 39.1 53.0 0.707 0.0 CA
HOH
4.513
3.488
N
O
CA
O
4il1 1 P62161,P63100,P63329 84.52 5e-93 X-RAY
2013-10-02 GLY A:223 A:223 60.0 0.8 65.6 37.3 60.0 0.8 0.0 CA
4.662
N
CA
GLY B:223 B:223 59.0 0.787 65.7 37.4 NA NA NA
GLY C:223 C:223 56.0 0.747 74.3 20.8 NA NA NA
GLY D:223 D:223 53.0 0.707 68.8 31.7 NA NA NA
2p6b 3 P63098 83.87 6e-89 X-RAY
2007-06-05 GLY C:52 B:65 51.0 0.68 52.0 35.4 51.0 0.68 0.0 CA
HOH
4.600
3.639
N
CA
CA
O
GLY E:52 D:65 52.0 0.693 65.9 30.3 52.0 0.693 0.0 CA
HOH
4.468
5.690
N
CA
CA
O
6nuc 2 P63098 83.87 6e-89 X-RAY
2019-07-03 GLY B:52 B:66 55.0 0.733 71.0 18.6 55.0 0.733 0.0 CA
HOH
4.206
4.143
H
HA2
CA
O
6nuf 2 P63098 83.87 6e-89 X-RAY
2019-07-03 GLY B:52 B:66 57.0 0.76 73.4 16.0 57.0 0.76 0.0 CA
HOH
4.088
4.185
H
HA3
CA
O
6nuu 2 P63098 83.87 6e-89 X-RAY
2019-07-03 GLY B:52 B:66 57.0 0.76 78.5 11.1 57.0 0.76 0.0 CA
HOH
4.111
4.421
H
HA2
CA
O
3ll8 3 P63098 83.87 7e-89 X-RAY
2011-01-12 GLY C:51 B:65 56.0 0.747 62.7 21.9 56.0 0.747 0.0 CA
HOH
4.734
3.746
N
CA
CA
O
GLY E:51 D:65 57.0 0.76 S 64.0 9.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96lz3-f1 1 Q96LZ3 100.0 3e-123 GLY A:66 A:66 55.0 0.733 79.9 23.3
af-p63098-f1 1 P63098 84.71 2e-102 GLY A:66 A:66 54.0 0.72 78.0 24.1