Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 104357046 . G A CCDS6759.1:NM_147180.2:c.167cCg>cTg_NP_671709.1:p.56P>L Homo sapiens protein phosphatase 3, regulatory subunit B, beta (PPP3R2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1mf8 2 P63098 84.71 4e-102 X-RAY
 2002-10-16 PRO B:53 B:52 73.0 0.503 T -74.7 -5.6 50.0 0.345 0.158 A:Q08209:0.159
4f0z 2 P63098 84.71 4e-102 X-RAY
 2013-03-06 PRO B:53 B:52 61.0 0.421 T -67.7 -11.5 26.0 0.179 0.242 C:O36972:0.159
A:Q08209:0.124
 HOH
 3.324
 HB3
 O
4or9 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 PRO B:53 B:52 76.0 0.524 T -73.7 -7.6 30.0 0.207 0.317 A:P16298:0.317
 HOH
 2.785
 O
 O
4ora 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 PRO B:53 B:52 73.0 0.503 T -70.0 -9.8 30.0 0.207 0.296 A:P16298:0.297
 HOH
 3.075
 O
 O
4orb 2 Q63810 84.71 4e-102 X-RAY
 2015-05-20 PRO B:53 B:52 69.0 0.476 T -77.3 -13.9 50.0 0.345 0.131 A:P63328:0.131
4orc 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 PRO B:53 B:52 75.0 0.517 T -77.5 -2.5 40.0 0.276 0.241 A:P16298:0.241
5sve 2 P63098 84.71 4e-102 X-RAY
 2017-01-11 PRO B:53 B:52 74.0 0.51 T -79.1 3.8 28.0 0.193 0.317 A:Q08209:0.166
C:None:0.234
 HOH
 7.208
 N
 O
1aui 2 P63098 84.62 4e-101 X-RAY
 1997-12-03 PRO B:52 B:52 80.0 0.552 T -70.7 -15.6 51.0 0.352 0.2 A:Q08209:0.2
 HOH
 2.866
 O
 O
1m63 2 P63098 84.62 4e-101 X-RAY
 2002-09-25 PRO B:52 B:52 66.0 0.455 T -57.1 -35.4 42.0 0.29 0.165 A:Q08209:0.166
PRO F:52 F:52 73.0 0.503 T -67.1 -28.0 46.0 0.317 0.186 E:Q08209:0.186
1tco 2 P63099 84.62 4e-101 X-RAY
 1997-02-12 PRO B:52 B:52 60.0 0.414 T -56.9 -15.6 39.0 0.269 0.145 A:P48452:0.145
 FK5
HOH
 7.717
3.039
 CG
O
 C40
O
4il1 1 P62161,P63100,P63329 84.52 5e-93 X-RAY
 2013-10-02 PRO A:210 A:210 42.0 0.29 T -59.9 -19.6 42.0 0.29 0.0 HOH
 8.299
 O
 O
PRO B:210 B:210 44.0 0.303 T -58.2 -20.2 NA NA NA
PRO C:210 C:210 45.0 0.31 T -59.8 -19.9 NA NA NA
PRO D:210 D:210 42.0 0.29 T -60.3 -19.2 NA NA NA
2p6b 3 P63098 83.87 6e-89 X-RAY
 2007-06-05 PRO C:39 B:52 68.0 0.469 T -69.6 -7.2 42.0 0.29 0.179 B:Q08209:0.179
 HOH
 3.746
 CG
 O
PRO E:39 D:52 71.0 0.49 T -66.7 -9.9 47.0 0.324 0.166 D:Q08209:0.166
 HOH
 2.927
 O
 O
6nuc 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 PRO B:39 B:53 73.0 0.503 T -73.0 -4.5 31.0 0.214 0.289 A:Q08209:0.159
C:P19634:0.186
 HOH
 2.753
 O
 O
6nuf 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 PRO B:39 B:53 74.0 0.51 T -73.0 -7.4 31.0 0.214 0.296 A:Q08209:0.159
C:P19634:0.207
 HOH
 2.733
 O
 O
6nuu 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 PRO B:39 B:53 68.0 0.469 T -78.2 -6.8 28.0 0.193 0.276 A:Q08209:0.166
C:P19634:0.186
 HOH
 3.076
 O
 O
3ll8 3 P63098 83.87 7e-89 X-RAY
 2011-01-12 PRO C:38 B:52 65.0 0.448 T -73.2 -1.3 44.0 0.303 0.145 B:Q08209:0.145
 HOH
 3.056
 O
 O
PRO E:38 D:52 75.0 0.517 T -71.8 -14.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96lz3-f1 1 Q96LZ3 100.0 3e-123 PRO A:53 A:53 65.0 0.448 T -68.8 -13.5
af-p63098-f1 1 P63098 84.71 2e-102 PRO A:53 A:53 62.0 0.428 T -69.8 -9.3