Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 104357073 . A C CCDS6759.1:NM_147180.2:c.140aTg>aGg_NP_671709.1:p.47M>R Homo sapiens protein phosphatase 3, regulatory subunit B, beta (PPP3R2), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1mf8 2 P63098 84.71 4e-102 X-RAY
2002-10-16 MET B:44 B:43 72.0 0.389 T -66.0 -2.3 72.0 0.389 0.0
4f0z 2 P63098 84.71 4e-102 X-RAY
2013-03-06 MET B:44 B:43 67.0 0.362 H -71.8 -13.1 67.0 0.362 0.0 HOH
2.990
SD
O
4or9 2 P63098 84.71 4e-102 X-RAY
2015-05-20 MET B:44 B:43 66.0 0.357 T -70.5 -8.6 66.0 0.357 0.0 HOH
4.385
CE
O
4ora 2 P63098 84.71 4e-102 X-RAY
2015-05-20 MET B:44 B:43 63.0 0.341 H -68.9 -14.4 63.0 0.341 0.0 HOH
7.119
CE
O
4orb 2 Q63810 84.71 4e-102 X-RAY
2015-05-20 MET B:44 B:43 67.0 0.362 H -71.4 -6.2 67.0 0.362 0.0
4orc 2 P63098 84.71 4e-102 X-RAY
2015-05-20 MET B:44 B:43 59.0 0.319 H -72.8 -15.3 59.0 0.319 0.0
5sve 2 P63098 84.71 4e-102 X-RAY
2017-01-11 MET B:44 B:43 64.0 0.346 H -76.4 -5.4 64.0 0.346 0.0 HOH
8.701
SD
O
1aui 2 P63098 84.62 4e-101 X-RAY
1997-12-03 MET B:43 B:43 74.0 0.4 T -68.8 -4.7 74.0 0.4 0.0 HOH
3.151
CE
O
1m63 2 P63098 84.62 4e-101 X-RAY
2002-09-25 MET B:43 B:43 90.0 0.486 T -79.4 32.6 90.0 0.486 0.0
MET F:43 F:43 86.0 0.465 T -74.4 23.6 86.0 0.465 0.0
1tco 2 P63099 84.62 4e-101 X-RAY
1997-02-12 MET B:43 B:43 102.0 0.551 T -63.3 -19.1 102.0 0.551 0.0 HOH
3.397
O
O
4il1 1 P62161,P63100,P63329 84.52 5e-93 X-RAY
2013-10-02 MET A:201 A:201 61.0 0.33 T -67.5 35.2 61.0 0.33 0.0
MET B:201 B:201 45.0 0.243 H -57.4 -24.8 NA NA NA
MET C:201 C:201 51.0 0.276 H -59.4 -20.9 NA NA NA
MET D:201 D:201 66.0 0.357 H -56.2 -23.3 NA NA NA
2p6b 3 P63098 83.87 6e-89 X-RAY
2007-06-05 MET C:30 B:43 85.0 0.459 T -81.2 10.9 85.0 0.459 0.0 HOH
3.690
CB
O
MET E:30 D:43 78.0 0.422 T -77.0 6.8 78.0 0.422 0.0 HOH
7.714
CE
O
6nuc 2 P63098 83.87 6e-89 X-RAY
2019-07-03 MET B:30 B:44 61.0 0.33 H -68.7 -9.9 61.0 0.33 0.0 HOH
3.250
HE1
O
6nuf 2 P63098 83.87 6e-89 X-RAY
2019-07-03 MET B:30 B:44 67.0 0.362 H -70.1 -6.4 67.0 0.362 0.0 HOH
4.754
O
O
6nuu 2 P63098 83.87 6e-89 X-RAY
2019-07-03 MET B:30 B:44 68.0 0.368 H -60.6 -18.5 68.0 0.368 0.0 HOH
5.113
O
O
3ll8 3 P63098 83.87 7e-89 X-RAY
2011-01-12 MET C:29 B:43 66.0 0.357 T -71.1 -0.6 66.0 0.357 0.0 HOH
3.137
CB
O
MET E:29 D:43 82.0 0.443 T -81.8 21.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96lz3-f1 1 Q96LZ3 100.0 3e-123 MET A:44 A:44 71.0 0.384 H -73.1 -9.3
af-p63098-f1 1 P63098 84.71 2e-102 MET A:44 A:44 65.0 0.351 T -73.9 -6.8