Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 104357118 . T A CCDS6759.1:NM_147180.2:c.95aAg>aTg_NP_671709.1:p.32K>M Homo sapiens protein phosphatase 3, regulatory subunit B, beta (PPP3R2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1mf8 2 P63098 84.71 4e-102 X-RAY
 2002-10-16 LYS B:29 B:28 192.0 0.96 H -71.8 -36.0 153.0 0.765 0.195 A:Q08209:0.195
 CA
 8.289
 O
 CA
4f0z 2 P63098 84.71 4e-102 X-RAY
 2013-03-06 LYS B:29 B:28 133.0 0.665 H -64.4 -31.2 133.0 0.665 0.0 CA
HOH
 9.008
2.601
 O
HD2
 CA
O
4or9 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 LYS B:29 B:28 186.0 0.93 H -69.1 -30.0 106.0 0.53 0.4 A:P16298:0.4
 CA
HOH
 9.039
8.184
 O
N
 CA
O
4ora 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 LYS B:29 B:28 188.0 0.94 H -70.7 -32.1 110.0 0.55 0.39 A:P16298:0.39
 CA
HOH
 9.433
7.511
 O
NZ
 CA
O
4orb 2 Q63810 84.71 4e-102 X-RAY
 2015-05-20 LYS B:29 B:28 180.0 0.9 H -60.2 -40.6 123.0 0.615 0.285 A:P63328:0.285
 CA
 9.367
 O
 CA
4orc 2 P63098 84.71 4e-102 X-RAY
 2015-05-20 LYS B:29 B:28 185.0 0.925 H -65.9 -32.9 104.0 0.52 0.405 A:P16298:0.405
 CA
 9.341
 O
 CA
5sve 2 P63098 84.71 4e-102 X-RAY
 2017-01-11 LYS B:29 B:28 56.0 NA H -67.9 -34.0 56.0 NA NA CA
 8.918
 O
 CA
1aui 2 P63098 84.62 4e-101 X-RAY
 1997-12-03 LYS B:28 B:28 189.0 0.945 H -59.0 -35.1 122.0 0.61 0.335 A:Q08209:0.335
 CA
HOH
 8.811
4.221
 O
O
 CA
O
1m63 2 P63098 84.62 4e-101 X-RAY
 2002-09-25 LYS B:28 B:28 188.0 0.94 H -71.7 -29.5 156.0 0.78 0.16 A:Q08209:0.16
 CA
 8.880
 C
 CA
LYS F:28 F:28 182.0 0.91 H -82.0 -31.4 135.0 0.675 0.235 E:Q08209:0.235
 CA
 9.042
 C
 CA
1tco 2 P63099 84.62 4e-101 X-RAY
 1997-02-12 LYS B:28 B:28 157.0 0.785 H -50.7 -44.4 118.0 0.59 0.195 A:P48452:0.195
 CA
MYR
HOH
 8.437
8.563
2.997
 O
N
O
 CA
C4
O
4il1 1 P62161,P63100,P63329 84.52 5e-93 X-RAY
 2013-10-02 LYS A:186 A:186 110.0 0.55 H -52.2 -56.4 110.0 0.55 0.0 CA
 8.594
 O
 CA
LYS B:186 B:186 132.0 0.66 H -53.1 -55.9 NA NA NA
LYS C:186 C:186 124.0 0.62 H -52.2 -56.0 NA NA NA
LYS D:186 D:186 83.0 0.415 H -52.3 -56.2 NA NA NA
2p6b 3 P63098 83.87 6e-89 X-RAY
 2007-06-05 LYS C:15 B:28 181.0 0.905 H -78.3 -42.4 181.0 0.905 0.0 CA
HOH
 9.625
3.537
 O
CD
 CA
O
LYS E:15 D:28 177.0 0.885 H -58.3 -53.0 177.0 0.885 0.0 CA
HOH
 8.447
4.207
 O
O
 CA
O
6nuc 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 LYS B:15 B:29 154.0 0.77 H -66.1 -35.7 153.0 0.765 0.005 A:Q08209:0.005
 CA
HOH
 8.769
2.895
 O
O
 CA
O
6nuf 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 LYS B:15 B:29 144.0 0.72 H -68.1 -32.9 144.0 0.72 0.0 CA
HOH
 8.815
2.303
 O
HD3
 CA
O
6nuu 2 P63098 83.87 6e-89 X-RAY
 2019-07-03 LYS B:15 B:29 145.0 0.725 H -56.4 -38.3 145.0 0.725 0.0 CA
HOH
 8.876
2.561
 O
HZ1
 CA
O
3ll8 3 P63098 83.87 7e-89 X-RAY
 2011-01-12 LYS C:14 B:28 171.0 0.855 H -60.9 -34.6 171.0 0.855 0.0 CA
HOH
 8.943
3.197
 O
CE
 CA
O
LYS E:14 D:28 168.0 0.84 H -59.8 -46.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96lz3-f1 1 Q96LZ3 100.0 3e-123 LYS A:29 A:29 171.0 0.855 H -85.9 -28.7
af-p63098-f1 1 P63098 84.71 2e-102 LYS A:29 A:29 173.0 0.865 H -85.3 -25.7