Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 123731346 . A C CCDS6826.1:NM_001735.2:c.4213Tgt>Ggt_NP_001726.2:p.1405C>G Homo sapiens complement C5 (C5), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3prx 1 P01031 100.0 0.0 X-RAY
 2011-01-19 CYS A:1405 A:1405 4.0 0.03 E -138.2 170.2 4.0 0.03 0.0
CYS C:1405 C:1405 4.0 0.03 E -139.2 172.0 NA NA NA
3pvm 1 P01031 100.0 0.0 X-RAY
 2011-01-19 CYS A:1405 A:1405 3.0 0.022 E -140.9 166.3 3.0 0.022 0.0
CYS C:1405 C:1405 4.0 0.03 E -140.1 165.4 NA NA NA
5i5k 1 P01031 100.0 0.0 X-RAY
 2016-03-16 CYS A:1405 B:1405 6.0 0.044 E -151.2 146.9 6.0 0.044 0.0
CYS D:1405 A:1405 5.0 0.037 E -149.9 147.0 NA NA NA
7ad6 1 P01031 100.0 0.0 X-RAY
 2021-03-10 CYS A:1405 A:1405 5.0 0.037 E -118.7 134.3 5.0 0.037 0.0 EDO
 7.604
 SG
 O2
CYS B:1405 NA:NA DO NA DO DO DO NA NA NA
7ad7 1 P01031 100.0 0.0 X-RAY
 2021-03-10 CYS A:1405 NA:NA DO NA DO DO DO NA NA NA
CYS B:1405 A:1405 13.0 0.096 E -126.2 144.3 1.0 0.007 0.089 C:None:0.089
 HOH
 3.952
 SG
 O
3cu7 1 P01031 99.94 0.0 X-RAY
 2008-06-10 CYS A:1405 A:1405 7.0 0.052 E -126.6 171.4 7.0 0.052 0.0
CYS B:1405 B:1405 6.0 0.044 E -126.7 171.4 NA NA NA
3kls 1 P01031 99.94 0.0 X-RAY
 2009-11-24 CYS A:1405 A:1405 5.0 0.037 E -133.7 169.7 5.0 0.037 0.0
CYS C:1405 B:1405 5.0 0.037 E -134.8 169.7 NA NA NA
3km9 1 P01031 99.94 0.0 X-RAY
 2009-12-01 CYS A:1405 A:1405 8.0 0.059 E -124.2 179.7 8.0 0.059 0.0
CYS C:1405 B:1405 9.0 0.067 E -124.5 -176.2 NA NA NA
4e0s 1 P01031 99.94 0.0 X-RAY
 2012-04-18 CYS A:1405 A:1405 3.0 0.022 E -131.7 158.5 3.0 0.022 0.0
7nyc 6 P01031 100.0 0.0 EM
 2021-10-06 CYS G:1387 A:1387 29.0 0.215 E -133.9 134.6 29.0 0.215 0.0
7nyd 7 P01031 100.0 0.0 EM
 2021-10-06 CYS H:1387 A:1387 28.0 0.207 E -139.9 127.9 28.0 0.207 0.0
6i2x 2 P01031 100.0 0.0 ELECTRON CRYSTALLOGRAPHY
 2019-06-26 CYS B:728 A:1405 7.0 0.052 E -119.1 161.5 7.0 0.052 0.0
6rqj 1 P01031 100.0 0.0 EM
 2020-01-08 CYS A:728 A:1405 2.0 0.015 E -126.0 -177.2 2.0 0.015 0.0
5hcc 2 P01031 100.0 0.0 X-RAY
 2016-03-30 CYS B:727 A:1405 7.0 0.052 E -114.6 141.6 7.0 0.052 0.0 HOH
 4.390
 SG
 O
5hcd 2 P01031 100.0 0.0 X-RAY
 2016-03-30 CYS B:727 A:1405 6.0 0.044 E -114.8 142.0 6.0 0.044 0.0
5hce 2 P01031 100.0 0.0 X-RAY
 2016-03-30 CYS B:727 A:1405 7.0 0.052 E -115.2 139.8 7.0 0.052 0.0
4a5w 1 P01031 100.0 0.0 X-RAY
 2012-03-14 CYS A:1309 A:1405 29.0 0.215 59.1 69.4 29.0 0.215 0.0
6h03 1 P01031 100.0 0.0 EM
 2018-12-19 CYS A:1309 NA:NA DO NA DO DO DO NA NA NA
6h04 2 P01031 100.0 0.0 EM
 2018-12-19 CYS S:1309 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01031-f1 1 P01031 100.0 0.0 CYS A:1405 A:1405 1.0 0.007 E -136.9 149.8