Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187016 . A C CCDS6498.1:NM_021068.2:c.515aTg>aGg_NP_066546.1:p.172M>R Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 MET A:152 A:149 47.0 0.254 H -46.4 -46.5 47.0 0.254 0.0
MET C:152 C:149 47.0 0.254 H -41.7 -48.5 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 MET A:149 A:148 26.0 0.141 H -67.6 -49.9 26.0 0.141 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 MET B:148 A:148 33.0 0.178 H -67.6 -50.6 1.0 0.005 0.173 A:P48551:0.173
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 MET A:148 D:148 37.0 0.2 H -48.7 -52.0 1.0 0.005 0.195 B:None:0.195
MET D:148 E:148 39.0 0.211 H -48.8 -52.3 NA NA NA
MET G:148 F:148 39.0 0.211 H -49.6 -50.9 NA NA NA
MET J:148 G:148 39.0 0.211 H -51.3 -51.4 NA NA NA
MET M:148 H:148 39.0 0.211 H -48.7 -51.1 NA NA NA
MET P:148 I:148 40.0 0.216 H -48.7 -53.6 NA NA NA
MET S:148 X:148 38.0 0.205 H -47.8 -52.7 NA NA NA
MET V:148 N:148 38.0 0.205 H -49.3 -50.6 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 MET A:149 A:149 84.0 0.454 H -56.7 -41.3 84.0 0.454 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 MET B:149 B:148 42.0 0.227 H -57.0 -40.9 8.0 0.043 0.184 C:P48551:0.184
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 MET C:150 C:148 55.0 0.297 H -62.2 -52.5 55.0 0.297 0.0
MET D:150 D:148 61.0 0.33 H -61.6 -44.5 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 MET A:151 A:148 48.0 0.259 H -56.8 -44.8 6.0 0.032 0.227 B:P48551:0.227
 HOH
 6.939
 N
 O
MET C:151 C:148 49.0 0.265 H -50.5 -45.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 MET A:172 A:172 64.0 0.346 H -62.7 -39.2
af-p01571-f1 1 P01571 95.77 9e-135 MET A:172 A:172 47.0 0.254 H -61.6 -41.5
af-p01566-f1 1 P01566 95.77 1e-134 MET A:172 A:172 48.0 0.259 H -57.5 -43.1
af-p01567-f1 1 P01567 93.65 6e-130 MET A:172 A:172 48.0 0.259 H -58.2 -42.7
af-p01568-f1 1 P01568 92.06 9e-129 MET A:172 A:172 46.0 0.249 H -58.9 -42.5
af-p05015-f1 1 P05015 88.89 1e-125 MET A:172 A:172 46.0 0.249 H -56.5 -41.3
af-p01569-f1 1 P01569 83.6 4e-120 MET A:172 A:172 44.0 0.238 H -56.3 -42.2
af-p01570-f1 1 P01570 84.13 2e-119 MET A:172 A:172 69.0 0.373 H -61.7 -37.7
af-p05013-f1 1 P05013 81.48 3e-112 MET A:172 A:172 49.0 0.265 H -59.4 -37.6
af-p32881-f1 1 P32881 81.48 3e-111 MET A:172 A:172 46.0 0.249 H -56.6 -42.6
af-p01563-f1 1 P01563 80.95 3e-106 MET A:171 A:171 65.0 0.351 H -60.7 -41.3