Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187061 . T A CCDS6498.1:NM_021068.2:c.470aAg>aTg_NP_066546.1:p.157K>M Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 LYS A:137 A:134 70.0 0.35 T -90.6 13.1 70.0 0.35 0.0
LYS C:137 C:134 69.0 0.345 T -97.7 10.9 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 LYS A:134 A:133 96.0 0.48 T -82.9 5.2 96.0 0.48 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 LYS B:133 A:133 27.0 0.135 T -83.6 5.8 27.0 0.135 0.0
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 LYS A:133 D:133 72.0 0.36 H -83.6 -0.4 72.0 0.36 0.0
LYS D:133 E:133 71.0 0.355 T -83.6 0.2 NA NA NA
LYS G:133 F:133 72.0 0.36 T -84.7 1.6 NA NA NA
LYS J:133 G:133 70.0 0.35 T -84.1 0.1 NA NA NA
LYS M:133 H:133 70.0 0.35 T -83.9 1.3 NA NA NA
LYS P:133 I:133 69.0 0.345 T -84.1 1.2 NA NA NA
LYS S:133 X:133 73.0 0.365 T -83.6 1.5 NA NA NA
LYS V:133 N:133 73.0 0.365 T -83.1 0.8 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 LYS A:134 A:134 48.0 0.24 H -100.1 -5.0 48.0 0.24 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 LYS B:134 B:133 67.0 0.335 T -81.4 0.7 67.0 0.335 0.0
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 LYS C:135 C:133 79.0 0.395 T -98.1 29.8 79.0 0.395 0.0 HOH
 7.733
 NZ
 O
LYS D:135 D:133 81.0 0.405 T -87.8 -0.9 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 LYS A:136 A:133 70.0 0.35 T -80.6 -2.7 70.0 0.35 0.0 HOH
 4.255
 NZ
 O
LYS C:136 C:133 70.0 0.35 T -74.3 -3.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 LYS A:157 A:157 71.0 0.355 T -82.6 4.5
af-p01571-f1 1 P01571 95.77 9e-135 LYS A:157 A:157 69.0 0.345 T -84.7 9.3
af-p01566-f1 1 P01566 95.77 1e-134 ARG A:157 A:157 94.0 0.418 T -87.1 6.3
af-p01567-f1 1 P01567 93.65 6e-130 LYS A:157 A:157 59.0 0.295 T -82.1 5.5
af-p01568-f1 1 P01568 92.06 9e-129 LYS A:157 A:157 72.0 0.36 T -82.5 6.6
af-p05015-f1 1 P05015 88.89 1e-125 LYS A:157 A:157 74.0 0.37 T -88.1 6.7
af-p01569-f1 1 P01569 83.6 4e-120 LYS A:157 A:157 69.0 0.345 T -83.2 7.2
af-p01570-f1 1 P01570 84.13 2e-119 LYS A:157 A:157 60.0 0.3 T -80.1 7.2
af-p05013-f1 1 P05013 81.48 3e-112 LYS A:157 A:157 69.0 0.345 T -82.5 5.7
af-p32881-f1 1 P32881 81.48 3e-111 LYS A:157 A:157 68.0 0.34 T -84.1 8.9
af-p01563-f1 1 P01563 80.95 3e-106 LYS A:156 A:156 58.0 0.29 T -80.7 6.3