Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187115 . G A CCDS6498.1:NM_021068.2:c.416tCc>tTc_NP_066546.1:p.139S>F Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 SER A:119 A:116 22.0 0.191 H -67.7 -49.3 22.0 0.191 0.0 HOH
 6.543
 O
 O
SER C:119 C:116 18.0 0.157 H -62.6 -48.3 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 SER A:116 A:115 15.0 0.13 H -49.8 -57.0 15.0 0.13 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 SER B:115 A:115 1.0 0.009 H -62.5 -42.5 1.0 0.009 0.0
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 SER A:115 D:115 16.0 0.139 H -63.5 -47.1 16.0 0.139 0.0
SER D:115 E:115 14.0 0.122 H -63.9 -48.6 NA NA NA
SER G:115 F:115 11.0 0.096 H -64.2 -46.6 NA NA NA
SER J:115 G:115 38.0 0.33 H -63.6 -49.1 NA NA NA
SER M:115 H:115 12.0 0.104 H -63.6 -47.7 NA NA NA
SER P:115 I:115 15.0 0.13 H -63.3 -49.5 NA NA NA
SER S:115 X:115 14.0 0.122 H -62.7 -48.9 NA NA NA
SER V:115 N:115 11.0 0.096 H -63.5 -48.5 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 SER A:116 A:116 6.0 0.052 H -76.9 -47.3 6.0 0.052 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 SER B:116 B:115 38.0 0.33 H -55.6 -46.6 38.0 0.33 0.0
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 SER C:117 C:115 0.0 0.0 H -68.0 -41.2 0.0 0.0 0.0
SER D:117 D:115 2.0 0.017 H -66.0 -35.6 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 SER A:118 A:115 32.0 0.278 H -61.0 -58.9 32.0 0.278 0.0 HOH
 7.049
 O
 O
SER C:118 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 SER A:139 A:139 7.0 0.061 H -67.1 -40.9
af-p01571-f1 1 P01571 95.77 9e-135 SER A:139 A:139 7.0 0.061 H -68.1 -39.6
af-p01566-f1 1 P01566 95.77 1e-134 SER A:139 A:139 6.0 0.052 H -67.5 -41.6
af-p01567-f1 1 P01567 93.65 6e-130 PHE A:139 A:139 24.0 0.114 H -65.6 -44.1
af-p01568-f1 1 P01568 92.06 9e-129 SER A:139 A:139 6.0 0.052 H -66.6 -41.2
af-p05015-f1 1 P05015 88.89 1e-125 SER A:139 A:139 4.0 0.035 H -65.0 -45.4
af-p01569-f1 1 P01569 83.6 4e-120 SER A:139 A:139 3.0 0.026 H -62.6 -41.4
af-p01570-f1 1 P01570 84.13 2e-119 SER A:139 A:139 5.0 0.043 H -69.2 -38.9
af-p05013-f1 1 P05013 81.48 3e-112 SER A:139 A:139 9.0 0.078 H -66.0 -41.9
af-p32881-f1 1 P32881 81.48 3e-111 SER A:139 A:139 3.0 0.026 H -63.6 -43.6
af-p01563-f1 1 P01563 80.95 3e-106 SER A:138 A:138 2.0 0.017 H -63.1 -44.5