Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187265 . T A CCDS6498.1:NM_021068.2:c.266aAt>aTt_NP_066546.1:p.89N>I Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 ASN A:69 A:66 70.0 0.438 H -62.0 -36.8 70.0 0.438 0.0
ASN C:69 C:66 68.0 0.425 H -60.0 -41.7 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 ASN A:66 A:65 63.0 0.394 H -62.6 -49.9 63.0 0.394 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 ASN B:65 A:65 103.0 0.644 H -59.9 -44.8 103.0 0.644 0.0
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 ASN A:65 D:65 72.0 0.45 H -59.3 -48.3 72.0 0.45 0.0
ASN D:65 E:65 74.0 0.463 H -59.0 -49.4 NA NA NA
ASN G:65 F:65 73.0 0.456 H -58.1 -49.8 NA NA NA
ASN J:65 G:65 71.0 0.444 H -58.2 -50.3 NA NA NA
ASN M:65 H:65 72.0 0.45 H -58.4 -49.4 NA NA NA
ASN P:65 I:65 73.0 0.456 H -58.7 -49.4 NA NA NA
ASN S:65 X:65 74.0 0.463 H -58.4 -49.1 NA NA NA
ASN V:65 N:65 73.0 0.456 H -58.1 -50.8 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 ASN A:66 A:66 86.0 0.537 H -75.7 -29.1 86.0 0.537 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 ASN B:66 B:65 65.0 NA H -65.1 -17.8 11.0 NA NA A:P17181:NA
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 ASN C:67 C:65 105.0 0.656 H -64.7 -36.4 41.0 0.256 0.4 A:Q6PJF2:0.4
ASN D:67 D:65 99.0 0.619 H -56.9 -46.2 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 ASN A:68 A:65 116.0 0.725 H -69.1 -42.0 116.0 0.725 0.0 HOH
 2.289
 ND2
 O
ASN C:68 C:65 115.0 0.719 H -55.9 -53.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 ASN A:89 A:89 70.0 0.438 H -61.2 -46.1
af-p01571-f1 1 P01571 95.77 9e-135 ASN A:89 A:89 72.0 0.45 H -62.3 -45.2
af-p01566-f1 1 P01566 95.77 1e-134 ASN A:89 A:89 73.0 0.456 H -61.3 -44.7
af-p01567-f1 1 P01567 93.65 6e-130 ASN A:89 A:89 71.0 0.444 H -61.4 -46.6
af-p01568-f1 1 P01568 92.06 9e-129 ASN A:89 A:89 72.0 0.45 H -62.1 -44.7
af-p05015-f1 1 P05015 88.89 1e-125 ASN A:89 A:89 72.0 0.45 H -61.9 -44.0
af-p01569-f1 1 P01569 83.6 4e-120 ASN A:89 A:89 73.0 0.456 H -58.5 -41.9
af-p01570-f1 1 P01570 84.13 2e-119 ASN A:89 A:89 73.0 0.456 H -61.5 -45.2
af-p05013-f1 1 P05013 81.48 3e-112 ASN A:89 A:89 72.0 0.45 H -61.9 -44.9
af-p32881-f1 1 P32881 81.48 3e-111 ASN A:89 A:89 72.0 0.45 H -62.4 -44.1
af-p01563-f1 1 P01563 80.95 3e-106 ASN A:88 A:88 73.0 0.456 H -63.2 -43.6