Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187274 . T A CCDS6498.1:NM_021068.2:c.257cAg>cTg_NP_066546.1:p.86Q>L Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 GLN A:66 A:63 29.0 0.161 H -68.0 -47.9 29.0 0.161 0.0
GLN C:66 C:63 29.0 0.161 H -68.4 -46.1 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 GLN A:63 A:62 5.0 0.028 H -47.7 -36.4 5.0 0.028 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 GLN B:62 A:62 22.0 0.122 H -67.4 -43.5 22.0 0.122 0.0
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 GLN A:62 D:62 37.0 0.206 H -64.1 -40.1 37.0 0.206 0.0
GLN D:62 E:62 37.0 0.206 H -64.1 -39.4 NA NA NA
GLN G:62 F:62 36.0 0.2 H -65.5 -39.4 NA NA NA
GLN J:62 G:62 37.0 0.206 H -62.6 -42.0 NA NA NA
GLN M:62 H:62 36.0 0.2 H -64.6 -39.7 NA NA NA
GLN P:62 I:62 37.0 0.206 H -66.9 -38.0 NA NA NA
GLN S:62 X:62 36.0 0.2 H -65.0 -37.9 NA NA NA
GLN V:62 N:62 37.0 0.206 H -63.6 -41.1 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 GLN A:63 A:63 26.0 0.144 H -69.5 -43.3 26.0 0.144 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 GLN B:63 B:62 62.0 0.344 H -81.6 -37.9 1.0 0.006 0.338 A:P17181:0.339
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 GLN C:64 C:62 33.0 0.183 H -64.6 -54.6 18.0 0.1 0.083 A:Q6PJF2:0.083
 HOH
 8.225
 NE2
 O
GLN D:64 D:62 28.0 0.156 H -76.3 -42.9 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 GLN A:65 A:62 47.0 0.261 H -64.8 -39.3 47.0 0.261 0.0 HOH
 2.884
 NE2
 O
GLN C:65 C:62 57.0 0.317 H -66.6 -36.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 GLN A:86 A:86 44.0 0.244 H -66.3 -36.9
af-p01571-f1 1 P01571 95.77 9e-135 GLN A:86 A:86 43.0 0.239 H -65.2 -37.7
af-p01566-f1 1 P01566 95.77 1e-134 GLN A:86 A:86 45.0 0.25 H -65.4 -37.0
af-p01567-f1 1 P01567 93.65 6e-130 GLN A:86 A:86 44.0 0.244 H -65.2 -36.9
af-p01568-f1 1 P01568 92.06 9e-129 GLN A:86 A:86 41.0 0.228 H -65.3 -37.9
af-p05015-f1 1 P05015 88.89 1e-125 GLN A:86 A:86 43.0 0.239 H -67.3 -35.8
af-p01569-f1 1 P01569 83.6 4e-120 GLN A:86 A:86 43.0 0.239 H -66.2 -35.2
af-p01570-f1 1 P01570 84.13 2e-119 GLN A:86 A:86 37.0 0.206 H -67.2 -36.5
af-p05013-f1 1 P05013 81.48 3e-112 GLN A:86 A:86 40.0 0.222 H -66.0 -35.2
af-p32881-f1 1 P32881 81.48 3e-111 GLN A:86 A:86 43.0 0.239 H -66.9 -35.9
af-p01563-f1 1 P01563 80.95 3e-106 GLN A:85 A:85 40.0 0.222 H -68.8 -36.2