Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187343 . T A CCDS6498.1:NM_021068.2:c.188gAg>gTg_NP_066546.1:p.63E>V Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 GLN A:43 A:40 75.0 0.417 G -51.4 -35.8 38.0 0.211 0.206 B:None:0.206
 HOH
 3.553
 OE1
 O
GLN C:43 C:40 92.0 0.511 G -49.7 -33.2 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 GLN A:41 A:40 107.0 0.594 H -58.0 -19.6 107.0 0.594 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 GLN B:40 A:40 88.0 0.489 -87.3 -15.3 88.0 0.489 0.0
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 GLN A:40 D:40 108.0 0.6 G -70.8 -33.7 50.0 0.278 0.322 B:None:0.322
GLN D:40 E:40 105.0 0.583 G -70.5 -34.7 NA NA NA
GLN G:40 F:40 109.0 0.606 G -70.7 -35.6 NA NA NA
GLN J:40 G:40 108.0 0.6 G -71.7 -34.1 NA NA NA
GLN M:40 H:40 109.0 0.606 G -70.3 -35.3 NA NA NA
GLN P:40 I:40 108.0 0.6 G -71.0 -34.1 NA NA NA
GLN S:40 X:40 110.0 0.611 G -70.2 -36.5 NA NA NA
GLN V:40 N:40 97.0 0.539 G -69.0 -36.1 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 GLN A:40 A:40 54.0 0.3 H -64.9 -27.0 54.0 0.3 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 GLN B:41 B:40 88.0 0.489 G -68.5 -17.4 88.0 0.489 0.0
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 GLN C:42 C:40 118.0 0.656 G -64.1 -26.7 118.0 0.656 0.0
GLN D:42 D:40 96.0 0.533 G -70.8 -17.9 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 GLN A:43 A:40 87.0 0.483 G -65.7 -18.0 87.0 0.483 0.0 HOH
 2.622
 OE1
 O
GLN C:43 C:40 110.0 NA -42.7 360.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 GLU A:63 A:63 88.0 0.463 G -60.8 -34.1
af-p01571-f1 1 P01571 95.77 9e-135 GLN A:63 A:63 94.0 0.522 H -63.6 -34.0
af-p01566-f1 1 P01566 95.77 1e-134 GLN A:63 A:63 101.0 0.561 H -64.0 -33.6
af-p01567-f1 1 P01567 93.65 6e-130 GLU A:63 A:63 89.0 0.468 H -69.9 -38.5
af-p01568-f1 1 P01568 92.06 9e-129 GLN A:63 A:63 66.0 0.367 T -63.6 -35.4
af-p05015-f1 1 P05015 88.89 1e-125 GLN A:63 A:63 99.0 0.55 H -58.6 -36.3
af-p01569-f1 1 P01569 83.6 4e-120 GLN A:63 A:63 121.0 0.672 G -56.5 -33.6
af-p01570-f1 1 P01570 84.13 2e-119 GLN A:63 A:63 82.0 0.456 -69.2 -33.6
af-p05013-f1 1 P05013 81.48 3e-112 GLN A:63 A:63 79.0 0.439 H -61.8 -38.9
af-p32881-f1 1 P32881 81.48 3e-111 GLN A:63 A:63 50.0 0.278 H -57.1 -34.4
af-p01563-f1 1 P01563 80.95 3e-106 GLN A:63 A:63 92.0 0.511 G -64.0 -31.1