Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187398 . C A CCDS6498.1:NM_021068.2:c.133Gga>Tga_NP_066546.1:p.45G>* Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 SER A:25 A:22 43.0 0.374 -63.6 141.8 43.0 0.374 0.0
SER C:25 C:22 44.0 0.383 -61.1 140.0 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 ARG A:23 A:22 88.0 0.391 -97.8 114.1 88.0 0.391 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 ARG B:22 A:22 96.0 0.427 -61.3 145.9 31.0 0.138 0.289 A:P48551:0.289
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 ARG A:22 D:22 139.0 0.618 -56.8 134.8 108.0 0.48 0.138 B:None:0.138
ARG D:22 E:22 140.0 0.622 -56.3 134.3 NA NA NA
ARG G:22 F:22 140.0 0.622 -56.3 135.1 NA NA NA
ARG J:22 G:22 139.0 0.618 -56.4 133.2 NA NA NA
ARG M:22 H:22 136.0 0.604 -56.9 134.6 NA NA NA
ARG P:22 I:22 139.0 0.618 -55.0 134.3 NA NA NA
ARG S:22 X:22 141.0 0.627 -56.0 134.1 NA NA NA
ARG V:22 N:22 140.0 0.622 -55.9 135.9 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 ARG A:22 A:22 189.0 0.84 S -103.4 -13.8 189.0 0.84 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 ARG B:23 B:22 129.0 0.573 -57.2 125.6 92.0 0.409 0.164 C:P48551:0.164
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 ARG C:24 C:22 118.0 0.524 -55.4 149.9 118.0 0.524 0.0
ARG D:24 D:22 121.0 0.538 -54.6 138.0 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 ARG A:25 A:22 129.0 0.573 -47.2 131.8 92.0 0.409 0.164 B:P48551:0.164
 HOH
 2.965
 NH2
 O
ARG C:25 C:22 121.0 0.538 -44.0 128.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 GLY A:45 A:45 29.0 0.387 -64.3 111.1
af-p01571-f1 1 P01571 95.77 9e-135 GLY A:45 A:45 30.0 0.4 -64.6 117.6
af-p01566-f1 1 P01566 95.77 1e-134 GLY A:45 A:45 31.0 0.413 -63.6 111.7
af-p01567-f1 1 P01567 93.65 6e-130 GLY A:45 A:45 29.0 0.387 -65.4 112.7
af-p01568-f1 1 P01568 92.06 9e-129 GLY A:45 A:45 30.0 0.4 -63.5 119.6
af-p05015-f1 1 P05015 88.89 1e-125 GLY A:45 A:45 33.0 0.44 -63.3 112.0
af-p01569-f1 1 P01569 83.6 4e-120 GLY A:45 A:45 30.0 0.4 -63.6 113.6
af-p01570-f1 1 P01570 84.13 2e-119 ARG A:45 A:45 148.0 0.658 -61.7 121.2
af-p05013-f1 1 P05013 81.48 3e-112 ARG A:45 A:45 163.0 0.724 -58.7 122.3
af-p32881-f1 1 P32881 81.48 3e-111 ARG A:45 A:45 143.0 0.636 -66.0 116.1
af-p01563-f1 1 P01563 80.95 3e-106 ARG A:45 A:45 163.0 0.724 -61.4 121.6