Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187404 . G A CCDS6498.1:NM_021068.2:c.127Caa>Taa_NP_066546.1:p.43Q>* Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 GLN A:23 A:20 138.0 0.767 H -85.0 -17.6 138.0 0.767 0.0
GLN C:23 C:20 135.0 0.75 H -87.9 -16.3 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 GLN A:21 A:20 122.0 0.678 H -85.2 -14.5 122.0 0.678 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 GLN B:20 A:20 90.0 0.5 H -70.8 -30.3 79.0 0.439 0.061 A:P48551:0.061
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 GLN A:20 D:20 107.0 0.594 H -68.9 -23.6 107.0 0.594 0.0
GLN D:20 E:20 107.0 0.594 H -70.5 -23.0 NA NA NA
GLN G:20 F:20 109.0 0.606 H -67.6 -24.0 NA NA NA
GLN J:20 G:20 107.0 0.594 H -68.9 -24.8 NA NA NA
GLN M:20 H:20 108.0 0.6 H -67.7 -24.9 NA NA NA
GLN P:20 I:20 109.0 0.606 H -68.5 -23.2 NA NA NA
GLN S:20 X:20 108.0 0.6 H -68.2 -23.8 NA NA NA
GLN V:20 N:20 108.0 0.6 H -67.4 -24.8 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 GLN A:20 A:20 110.0 0.611 T -60.7 -19.3 110.0 0.611 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 GLN B:21 B:20 115.0 0.639 H -69.3 -25.6 115.0 0.639 0.0
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 GLN C:22 C:20 143.0 0.794 H -57.4 -34.7 143.0 0.794 0.0
GLN D:22 D:20 111.0 0.617 H -58.6 -33.8 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 GLN A:23 A:20 115.0 0.639 H -69.6 -23.3 115.0 0.639 0.0 HOH
 2.851
 NE2
 O
GLN C:23 C:20 115.0 0.639 H -69.0 -23.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 GLN A:43 A:43 113.0 0.628 H -68.9 -31.3
af-p01571-f1 1 P01571 95.77 9e-135 GLN A:43 A:43 112.0 0.622 H -69.1 -29.8
af-p01566-f1 1 P01566 95.77 1e-134 GLN A:43 A:43 111.0 0.617 H -69.9 -30.7
af-p01567-f1 1 P01567 93.65 6e-130 GLN A:43 A:43 113.0 0.628 H -68.4 -30.9
af-p01568-f1 1 P01568 92.06 9e-129 GLN A:43 A:43 110.0 0.611 H -68.6 -30.2
af-p05015-f1 1 P05015 88.89 1e-125 GLN A:43 A:43 111.0 0.617 H -68.3 -29.5
af-p01569-f1 1 P01569 83.6 4e-120 GLN A:43 A:43 115.0 0.639 H -68.3 -29.4
af-p01570-f1 1 P01570 84.13 2e-119 GLN A:43 A:43 119.0 0.661 H -68.7 -32.0
af-p05013-f1 1 P05013 81.48 3e-112 GLN A:43 A:43 119.0 0.661 H -67.6 -30.6
af-p32881-f1 1 P32881 81.48 3e-111 GLN A:43 A:43 111.0 0.617 H -69.9 -31.0
af-p01563-f1 1 P01563 80.95 3e-106 GLN A:43 A:43 114.0 0.633 H -68.2 -32.6