Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21187436 . A C CCDS6498.1:NM_021068.2:c.95cTg>cGg_NP_066546.1:p.32L>R Homo sapiens interferon alpha 4 (IFNA4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 81.07 1e-100 X-RAY
 2012-02-29 LEU A:12 A:9 131.0 0.771 360.0 -36.9 131.0 0.771 0.0
LEU C:12 C:9 81.0 0.476 360.0 108.0 NA NA NA
2lms 1 P01563 82.53 1e-99 NMR
 2012-12-05 LEU A:10 A:9 87.0 0.512 T -93.2 -35.2 87.0 0.512 0.0
2lag 2 P01563 82.53 2e-99 NMR
 2011-08-17 LEU B:9 A:9 90.0 0.529 -119.8 1.7 78.0 0.459 0.07 A:P48551:0.071
4z5r 1 P01563 82.53 2e-99 X-RAY
 2015-07-08 LEU A:9 D:9 174.0 1.0 360.0 50.5 174.0 1.0 0.0
LEU D:9 E:9 191.0 1.0 360.0 -179.5 NA NA NA
LEU G:9 F:9 188.0 1.0 360.0 61.2 NA NA NA
LEU J:9 G:9 186.0 1.0 360.0 133.9 NA NA NA
LEU M:9 H:9 192.0 1.0 360.0 43.3 NA NA NA
LEU P:9 I:9 165.0 0.971 360.0 106.4 NA NA NA
LEU S:9 X:9 168.0 0.988 360.0 96.0 NA NA NA
LEU V:9 N:9 182.0 1.0 360.0 -13.5 NA NA NA
6jhd 1 P32881 83.13 5e-99 NMR
 2020-02-19 LEU A:9 A:9 130.0 0.765 S -70.3 -74.5 130.0 0.765 0.0
3se3 2 Q86UP4 81.33 9e-98 X-RAY
 2011-08-31 LEU B:10 B:9 79.0 NA H -67.3 -25.6 51.0 NA NA C:P48551:NA
4ypg 3 P01563 83.23 1e-97 X-RAY
 2015-05-06 LEU C:11 C:9 31.0 0.182 S -97.4 159.1 31.0 0.182 0.0 HOH
 6.987
 N
 O
LEU D:11 D:9 78.0 0.459 S -74.0 124.2 NA NA NA
3s9d 1 P01563 81.33 4e-97 X-RAY
 2011-08-31 LEU A:12 A:9 58.0 NA H -73.9 -10.3 58.0 NA NA HOH
 5.640
 C
 O
LEU C:12 C:9 112.0 0.659 H -68.1 -30.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05014-f1 1 P05014 100.0 1e-141 LEU A:32 A:32 78.0 0.459 H -63.7 -37.0
af-p01571-f1 1 P01571 95.77 9e-135 LEU A:32 A:32 74.0 0.435 H -70.1 -32.5
af-p01566-f1 1 P01566 95.77 1e-134 LEU A:32 A:32 76.0 0.447 H -68.8 -33.1
af-p01567-f1 1 P01567 93.65 6e-130 LEU A:32 A:32 89.0 0.524 H -67.1 -42.6
af-p01568-f1 1 P01568 92.06 9e-129 LEU A:32 A:32 92.0 0.541 H -69.6 -44.2
af-p05015-f1 1 P05015 88.89 1e-125 LEU A:32 A:32 96.0 0.565 H -71.7 -42.0
af-p01569-f1 1 P01569 83.6 4e-120 LEU A:32 A:32 79.0 0.465 H -65.4 -41.3
af-p01570-f1 1 P01570 84.13 2e-119 LEU A:32 A:32 83.0 0.488 H -70.1 -44.2
af-p05013-f1 1 P05013 81.48 3e-112 LEU A:32 A:32 82.0 0.482 H -68.5 -36.5
af-p32881-f1 1 P32881 81.48 3e-111 LEU A:32 A:32 82.0 0.482 H -71.3 -32.3
af-p01563-f1 1 P01563 80.95 3e-106 LEU A:32 A:32 83.0 0.488 H -62.3 -39.4