Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21206682 . A C CCDS6499.1:NM_002171.1:c.415Tcc>Gcc_NP_002162.1:p.139S>A Homo sapiens interferon alpha 10 (IFNA10), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6jhd 1 P32881 81.93 2e-98 NMR
 2020-02-19 SER A:116 A:116 6.0 0.052 H -76.9 -47.3 6.0 0.052 0.0
2lms 1 P01563 81.33 3e-97 NMR
 2012-12-05 SER A:116 A:115 15.0 0.13 H -49.8 -57.0 15.0 0.13 0.0
2lag 2 P01563 81.33 3e-97 NMR
 2011-08-17 SER B:115 A:115 1.0 0.009 H -62.5 -42.5 1.0 0.009 0.0
4z5r 1 P01563 81.33 3e-97 X-RAY
 2015-07-08 SER A:115 D:115 16.0 0.139 H -63.5 -47.1 16.0 0.139 0.0
SER D:115 E:115 14.0 0.122 H -63.9 -48.6 NA NA NA
SER G:115 F:115 11.0 0.096 H -64.2 -46.6 NA NA NA
SER J:115 G:115 38.0 0.33 H -63.6 -49.1 NA NA NA
SER M:115 H:115 12.0 0.104 H -63.6 -47.7 NA NA NA
SER P:115 I:115 15.0 0.13 H -63.3 -49.5 NA NA NA
SER S:115 X:115 14.0 0.122 H -62.7 -48.9 NA NA NA
SER V:115 N:115 11.0 0.096 H -63.5 -48.5 NA NA NA
4ypg 3 P01563 81.99 2e-95 X-RAY
 2015-05-06 SER C:117 C:115 0.0 0.0 H -68.0 -41.2 0.0 0.0 0.0
SER D:117 D:115 2.0 0.017 H -66.0 -35.6 NA NA NA
3se3 2 Q86UP4 80.12 3e-95 X-RAY
 2011-08-31 SER B:116 B:115 38.0 0.33 H -55.6 -46.6 38.0 0.33 0.0
3s9d 1 P01563 80.12 1e-94 X-RAY
 2011-08-31 SER A:118 A:115 32.0 0.278 H -61.0 -58.9 32.0 0.278 0.0 HOH
 7.049
 O
 O
SER C:118 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01566-f1 1 P01566 100.0 4e-141 SER A:139 A:139 6.0 0.052 H -67.5 -41.6
af-p05014-f1 1 P05014 95.77 1e-134 SER A:139 A:139 7.0 0.061 H -67.1 -40.9
af-p01571-f1 1 P01571 95.24 2e-134 SER A:139 A:139 7.0 0.061 H -68.1 -39.6
af-p01567-f1 1 P01567 92.06 2e-129 PHE A:139 A:139 24.0 0.114 H -65.6 -44.1
af-p01568-f1 1 P01568 91.01 4e-127 SER A:139 A:139 6.0 0.052 H -66.6 -41.2
af-p05015-f1 1 P05015 87.3 2e-122 SER A:139 A:139 4.0 0.035 H -65.0 -45.4
af-p01570-f1 1 P01570 84.13 8e-121 SER A:139 A:139 5.0 0.043 H -69.2 -38.9
af-p01569-f1 1 P01569 82.54 1e-118 SER A:139 A:139 3.0 0.026 H -62.6 -41.4
af-p05013-f1 1 P05013 80.95 9e-112 SER A:139 A:139 9.0 0.078 H -66.0 -41.9
af-p32881-f1 1 P32881 80.42 6e-111 SER A:139 A:139 3.0 0.026 H -63.6 -43.6