Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21217022 . C A CCDS34996.1:NM_002173.2:c.283Gat>Tat_NP_002164.1:p.95D>Y Homo sapiens interferon, alpha 16 (IFNA16), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 81.93 4e-98 NMR
 2012-12-05 ASP A:72 A:71 64.0 0.427 H -51.8 -42.8 64.0 0.427 0.0
2lag 2 P01563 81.93 5e-98 NMR
 2011-08-17 ASP B:71 A:71 68.0 0.453 H -70.9 -57.2 68.0 0.453 0.0
4z5r 1 P01563 81.93 5e-98 X-RAY
 2015-07-08 ASP A:71 D:71 59.0 0.393 H -67.8 -37.9 59.0 0.393 0.0
ASP D:71 E:71 59.0 0.393 H -68.5 -37.0 NA NA NA
ASP G:71 F:71 58.0 0.387 H -68.4 -37.0 NA NA NA
ASP J:71 G:71 57.0 0.38 H -67.6 -37.2 NA NA NA
ASP M:71 H:71 59.0 0.393 H -67.1 -38.4 NA NA NA
ASP P:71 I:71 60.0 0.4 H -67.6 -38.2 NA NA NA
ASP S:71 X:71 60.0 0.4 H -67.8 -37.1 NA NA NA
ASP V:71 N:71 58.0 0.387 H -67.8 -38.2 NA NA NA
6jhd 1 P32881 83.73 1e-97 NMR
 2020-02-19 ASP A:72 A:72 84.0 0.56 T -56.9 -69.9 84.0 0.56 0.0
3se3 2 Q86UP4 80.72 8e-96 X-RAY
 2011-08-31 ASP B:72 B:71 75.0 0.5 H -70.2 -43.0 75.0 0.5 0.0
4ypg 3 P01563 82.61 8e-96 X-RAY
 2015-05-06 ASP C:73 C:71 65.0 0.433 H -65.2 -48.7 65.0 0.433 0.0
ASP D:73 D:71 59.0 0.393 H -58.9 -48.8 NA NA NA
3s9d 1 P01563 80.72 3e-95 X-RAY
 2011-08-31 ASP A:74 A:71 36.0 0.24 H -70.7 -41.7 36.0 0.24 0.0 HOH
 2.484
 OD2
 O
ASP C:74 C:71 65.0 0.433 H -68.1 -40.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05015-f1 1 P05015 100.0 5e-142 ASP A:95 A:95 67.0 0.447 H -65.2 -38.7
af-p05014-f1 1 P05014 88.89 1e-125 ASP A:95 A:95 66.0 0.44 H -62.1 -39.1
af-p01571-f1 1 P01571 87.3 1e-122 ASP A:95 A:95 64.0 0.427 H -62.6 -39.3
af-p01566-f1 1 P01566 87.3 2e-122 ASP A:95 A:95 65.0 0.433 H -61.4 -39.1
af-p01567-f1 1 P01567 85.71 8e-120 ASP A:95 A:95 66.0 0.44 H -60.7 -39.3
af-p01568-f1 1 P01568 85.71 2e-118 ASP A:95 A:95 65.0 0.433 H -66.5 -37.2
af-p01570-f1 1 P01570 83.6 1e-117 ASN A:95 A:95 67.0 0.419 H -66.6 -36.4
af-p01569-f1 1 P01569 82.54 9e-117 ASP A:95 A:95 67.0 0.447 H -64.6 -36.8
af-p32881-f1 1 P32881 82.01 2e-109 ASP A:95 A:95 67.0 0.447 H -67.1 -29.6
af-p01563-f1 1 P01563 80.42 2e-104 ASP A:94 A:94 66.0 0.44 H -64.8 -39.9