Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21217078 . G A CCDS34996.1:NM_002173.2:c.227gCc>gTc_NP_002164.1:p.76A>V Homo sapiens interferon, alpha 16 (IFNA16), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 81.93 4e-98 NMR
 2012-12-05 THR A:53 A:52 6.0 0.043 H -95.8 -9.4 6.0 0.043 0.0
2lag 2 P01563 81.93 5e-98 NMR
 2011-08-17 THR B:52 A:52 1.0 0.007 T -92.4 -2.0 1.0 0.007 0.0
4z5r 1 P01563 81.93 5e-98 X-RAY
 2015-07-08 THR A:52 D:52 22.0 0.157 T -111.3 18.6 22.0 0.157 0.0
THR D:52 E:52 21.0 0.15 T -109.7 16.4 NA NA NA
THR G:52 F:52 16.0 0.114 T -110.2 16.6 NA NA NA
THR J:52 G:52 45.0 0.321 T -111.0 18.6 NA NA NA
THR M:52 H:52 27.0 0.193 T -110.3 17.5 NA NA NA
THR P:52 I:52 41.0 0.293 T -111.3 17.4 NA NA NA
THR S:52 X:52 31.0 0.221 T -108.5 15.4 NA NA NA
THR V:52 N:52 10.0 0.071 T -109.8 16.5 NA NA NA
6jhd 1 P32881 83.73 1e-97 NMR
 2020-02-19 ALA A:53 A:53 0.0 0.0 H -56.2 -41.2 0.0 0.0 0.0
3se3 2 Q86UP4 80.72 8e-96 X-RAY
 2011-08-31 THR B:53 B:52 57.0 0.407 -97.6 -3.8 57.0 0.407 0.0
4ypg 3 P01563 82.61 8e-96 X-RAY
 2015-05-06 THR C:54 C:52 15.0 0.107 S -77.2 -37.0 15.0 0.107 0.0 HOH
 7.704
 CB
 O
THR D:54 D:52 3.0 0.021 H -59.0 -36.7 NA NA NA
3s9d 1 P01563 80.72 3e-95 X-RAY
 2011-08-31 THR A:55 A:52 67.0 0.479 -99.1 -21.5 67.0 0.479 0.0
THR C:55 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05015-f1 1 P05015 100.0 5e-142 ALA A:76 A:76 1.0 0.009 H -59.0 -42.7
af-p05014-f1 1 P05014 88.89 1e-125 ALA A:76 A:76 0.0 0.0 H -61.9 -40.3
af-p01571-f1 1 P01571 87.3 1e-122 ALA A:76 A:76 0.0 0.0 H -63.9 -40.4
af-p01566-f1 1 P01566 87.3 2e-122 ALA A:76 A:76 0.0 0.0 H -65.3 -38.7
af-p01567-f1 1 P01567 85.71 8e-120 ALA A:76 A:76 7.0 0.061 H -63.2 -42.4
af-p01568-f1 1 P01568 85.71 2e-118 ALA A:76 A:76 0.0 0.0 H -62.9 -38.8
af-p01570-f1 1 P01570 83.6 1e-117 ALA A:76 A:76 0.0 0.0 H -64.7 -37.9
af-p01569-f1 1 P01569 82.54 9e-117 ALA A:76 A:76 0.0 0.0 H -63.4 -38.7
af-p32881-f1 1 P32881 82.01 2e-109 ALA A:76 A:76 0.0 0.0 H -61.8 -40.1
af-p01563-f1 1 P01563 80.42 2e-104 THR A:75 A:75 6.0 0.043 H -74.4 -28.3