Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21217111 . A C CCDS34996.1:NM_002173.2:c.194gTg>gGg_NP_002164.1:p.65V>G Homo sapiens interferon, alpha 16 (IFNA16), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 81.93 4e-98 NMR
 2012-12-05 GLU A:43 A:42 103.0 0.542 H -91.2 -32.4 103.0 0.542 0.0
2lag 2 P01563 81.93 5e-98 NMR
 2011-08-17 GLU B:42 A:42 65.0 0.342 H -84.3 20.8 65.0 0.342 0.0
4z5r 1 P01563 81.93 5e-98 X-RAY
 2015-07-08 GLU A:42 D:42 38.0 0.2 G -72.3 -3.7 38.0 0.2 0.0
GLU D:42 E:42 38.0 0.2 G -72.7 -2.9 NA NA NA
GLU G:42 F:42 28.0 0.147 G -73.4 -3.0 NA NA NA
GLU J:42 G:42 53.0 0.279 G -71.7 -3.4 NA NA NA
GLU M:42 H:42 39.0 0.205 G -72.5 -3.5 NA NA NA
GLU P:42 I:42 39.0 0.205 G -73.1 -4.4 NA NA NA
GLU S:42 X:42 39.0 0.205 G -73.2 -3.4 NA NA NA
GLU V:42 N:42 31.0 0.163 G -72.1 -5.1 NA NA NA
6jhd 1 P32881 83.73 1e-97 NMR
 2020-02-19 GLU A:42 A:42 28.0 0.147 H -86.9 -27.2 28.0 0.147 0.0
3se3 2 Q86UP4 80.72 8e-96 X-RAY
 2011-08-31 GLU B:43 B:42 49.0 0.258 G -63.3 -20.6 49.0 0.258 0.0
4ypg 3 P01563 82.61 8e-96 X-RAY
 2015-05-06 GLU C:44 C:42 36.0 0.189 G -69.8 25.9 36.0 0.189 0.0
GLU D:44 D:42 48.0 0.253 G -84.9 7.1 NA NA NA
3s9d 1 P01563 80.72 3e-95 X-RAY
 2011-08-31 GLU A:45 A:42 51.0 0.268 G -76.8 -10.2 51.0 0.268 0.0 HOH
 7.712
 CG
 O
GLU C:45 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05015-f1 1 P05015 100.0 5e-142 VAL A:65 A:65 11.0 0.071 H -61.0 -29.7
af-p05014-f1 1 P05014 88.89 1e-125 GLU A:65 A:65 39.0 0.205 G -74.7 -13.3
af-p01571-f1 1 P01571 87.3 1e-122 GLU A:65 A:65 38.0 0.2 H -70.2 -37.9
af-p01566-f1 1 P01566 87.3 2e-122 GLU A:65 A:65 39.0 0.205 H -70.6 -39.0
af-p01567-f1 1 P01567 85.71 8e-120 GLU A:65 A:65 80.0 0.421 H -64.8 -25.9
af-p01568-f1 1 P01568 85.71 2e-118 GLU A:65 A:65 33.0 0.174 G -68.9 -21.7
af-p01570-f1 1 P01570 83.6 1e-117 GLU A:65 A:65 33.0 0.174 G -68.9 -20.1
af-p01569-f1 1 P01569 82.54 9e-117 GLU A:65 A:65 28.0 0.147 G -71.3 -18.3
af-p32881-f1 1 P32881 82.01 2e-109 GLU A:65 A:65 46.0 0.242 H -68.7 -23.7
af-p01563-f1 1 P01563 80.42 2e-104 GLU A:65 A:65 37.0 0.195 G -71.6 -11.1