Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21217138 . C A CCDS34996.1:NM_002173.2:c.167aGa>aTa_NP_002164.1:p.56R>I Homo sapiens interferon, alpha 16 (IFNA16), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 81.93 4e-98 NMR
 2012-12-05 ARG A:34 A:33 125.0 0.556 S -46.7 -43.8 125.0 0.556 0.0
2lag 2 P01563 81.93 5e-98 NMR
 2011-08-17 ARG B:33 A:33 130.0 0.578 -133.8 146.1 53.0 0.236 0.342 A:P48551:0.342
4z5r 1 P01563 81.93 5e-98 X-RAY
 2015-07-08 ARG A:33 D:33 188.0 0.836 -63.2 155.1 32.0 0.142 0.694 B:None:0.142
C:None:0.662
ARG D:33 E:33 190.0 0.844 -62.4 155.3 NA NA NA
ARG G:33 F:33 190.0 0.844 -62.5 155.1 NA NA NA
ARG J:33 G:33 191.0 0.849 -63.2 155.4 NA NA NA
ARG M:33 H:33 193.0 0.858 -62.4 155.8 NA NA NA
ARG P:33 I:33 193.0 0.858 -63.7 154.8 NA NA NA
ARG S:33 X:33 189.0 0.84 -63.7 153.2 NA NA NA
ARG V:33 N:33 193.0 0.858 -61.1 156.0 NA NA NA
6jhd 1 P32881 83.73 1e-97 NMR
 2020-02-19 ARG A:33 A:33 147.0 0.653 -106.1 93.0 147.0 0.653 0.0
3se3 2 Q86UP4 80.72 8e-96 X-RAY
 2011-08-31 ARG B:34 B:33 169.0 0.751 -62.8 154.6 34.0 0.151 0.6 C:P48551:0.6
4ypg 3 P01563 82.61 8e-96 X-RAY
 2015-05-06 ARG C:35 C:33 154.0 0.684 -160.4 145.8 154.0 0.684 0.0 HOH
 8.437
 O
 O
ARG D:35 D:33 140.0 0.622 -144.2 135.3 NA NA NA
3s9d 1 P01563 80.72 3e-95 X-RAY
 2011-08-31 ARG A:36 A:33 175.0 0.778 -61.2 152.9 29.0 0.129 0.649 B:P48551:0.649
 HOH
 2.802
 O
 O
ARG C:36 C:33 168.0 0.747 -63.6 165.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05015-f1 1 P05015 100.0 5e-142 ARG A:56 A:56 142.0 0.631 -52.8 140.0
af-p05014-f1 1 P05014 88.89 1e-125 ARG A:56 A:56 133.0 0.591 -53.5 137.3
af-p01571-f1 1 P01571 87.3 1e-122 ARG A:56 A:56 174.0 0.773 -51.4 135.3
af-p01566-f1 1 P01566 87.3 2e-122 ARG A:56 A:56 153.0 0.68 -52.1 136.8
af-p01567-f1 1 P01567 85.71 8e-120 ARG A:56 A:56 158.0 0.702 -53.8 135.1
af-p01568-f1 1 P01568 85.71 2e-118 ARG A:56 A:56 167.0 0.742 -52.9 138.0
af-p01570-f1 1 P01570 83.6 1e-117 ARG A:56 A:56 156.0 0.693 -55.8 138.7
af-p01569-f1 1 P01569 82.54 9e-117 ARG A:56 A:56 165.0 0.733 -52.1 137.2
af-p32881-f1 1 P32881 82.01 2e-109 ARG A:56 A:56 174.0 0.773 -51.8 137.6
af-p01563-f1 1 P01563 80.42 2e-104 ARG A:56 A:56 129.0 0.573 -56.6 138.4