Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21217140 . G A CCDS34996.1:NM_002173.2:c.165gaC>gaT_NP_002164.1:p.55D>D Homo sapiens interferon, alpha 16 (IFNA16), mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 81.93 4e-98 NMR
 2012-12-05 ASP A:33 A:32 17.0 0.113 T -130.3 -31.5 17.0 0.113 0.0
2lag 2 P01563 81.93 5e-98 NMR
 2011-08-17 ASP B:32 A:32 56.0 0.373 S -80.4 59.3 56.0 0.373 0.0
4z5r 1 P01563 81.93 5e-98 X-RAY
 2015-07-08 ASP A:32 D:32 36.0 0.24 G -98.8 5.9 36.0 0.24 0.0
ASP D:32 E:32 34.0 0.227 G -100.0 4.9 NA NA NA
ASP G:32 F:32 33.0 0.22 G -99.0 5.2 NA NA NA
ASP J:32 G:32 34.0 0.227 G -98.9 3.9 NA NA NA
ASP M:32 H:32 34.0 0.227 G -100.3 5.7 NA NA NA
ASP P:32 I:32 34.0 0.227 G -99.6 5.8 NA NA NA
ASP S:32 X:32 32.0 0.213 G -98.7 5.3 NA NA NA
ASP V:32 N:32 32.0 0.213 G -100.5 4.4 NA NA NA
6jhd 1 P32881 83.73 1e-97 NMR
 2020-02-19 ASP A:32 A:32 52.0 0.347 T -93.5 28.1 52.0 0.347 0.0
3se3 2 Q86UP4 80.72 8e-96 X-RAY
 2011-08-31 ASP B:33 B:32 31.0 0.207 G -87.1 2.5 31.0 0.207 0.0
4ypg 3 P01563 82.61 8e-96 X-RAY
 2015-05-06 ASP C:34 C:32 50.0 0.333 -88.5 64.6 50.0 0.333 0.0
ASP D:34 D:32 39.0 0.26 -122.4 49.8 NA NA NA
3s9d 1 P01563 80.72 3e-95 X-RAY
 2011-08-31 ASP A:35 A:32 10.0 0.067 G -88.5 -1.0 10.0 0.067 0.0 HOH
 2.485
 OD1
 O
ASP C:35 C:32 15.0 0.1 G -92.6 8.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05015-f1 1 P05015 100.0 5e-142 ASP A:55 A:55 33.0 0.22 G -99.8 1.3
af-p05014-f1 1 P05014 88.89 1e-125 ASP A:55 A:55 35.0 0.233 G -101.9 0.1
af-p01571-f1 1 P01571 87.3 1e-122 ASP A:55 A:55 36.0 0.24 G -102.2 0.4
af-p01566-f1 1 P01566 87.3 2e-122 ASP A:55 A:55 37.0 0.247 G -95.0 -6.2
af-p01567-f1 1 P01567 85.71 8e-120 ASP A:55 A:55 33.0 0.22 G -101.7 0.1
af-p01568-f1 1 P01568 85.71 2e-118 ASP A:55 A:55 33.0 0.22 G -100.0 -0.6
af-p01570-f1 1 P01570 83.6 1e-117 ASP A:55 A:55 35.0 0.233 G -101.6 -0.8
af-p01569-f1 1 P01569 82.54 9e-117 ASP A:55 A:55 36.0 0.24 G -99.9 -1.9
af-p32881-f1 1 P32881 82.01 2e-109 ASP A:55 A:55 36.0 0.24 G -102.5 0.2
af-p01563-f1 1 P01563 80.42 2e-104 ASP A:55 A:55 34.0 0.227 G -101.9 -2.0