Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227633 . G A CCDS6500.1:NM_021268.2:c.540aaC>aaT_NP_067091.1:p.180N>N Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 ASN B:156 A:156 27.0 0.169 G -47.3 -31.5 23.0 0.144 0.025 A:P48551:0.025
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 ASN A:156 D:156 135.0 0.844 -116.3 360.0 130.0 0.812 0.032 B:None:0.031
ASN D:156 E:156 134.0 0.838 -83.8 360.0 NA NA NA
ASN G:156 F:156 146.0 0.912 -117.3 360.0 NA NA NA
ASN J:156 G:156 129.0 0.806 -80.5 360.0 NA NA NA
ASN M:156 H:156 139.0 0.869 -106.5 360.0 NA NA NA
ASN P:156 I:156 148.0 0.925 -126.2 360.0 NA NA NA
ASN S:156 X:156 161.0 1.0 -140.0 360.0 NA NA NA
ASN V:156 N:156 103.0 0.644 S -124.0 68.6 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 ASN A:157 A:156 77.0 0.481 -94.6 63.6 77.0 0.481 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 ASN A:157 A:157 67.0 0.419 T -178.2 -42.5 67.0 0.419 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 ASN C:158 C:156 102.0 0.637 -77.1 -9.6 102.0 0.637 0.0
ASN D:158 D:156 69.0 0.431 T -112.9 54.3 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 ASN B:157 B:156 171.0 1.0 -123.1 360.0 112.0 0.7 0.3 C:P48551:0.369
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 ASN A:159 A:156 170.0 1.0 -118.4 360.0 139.0 0.869 0.131 B:P48551:0.194
 HOH
 4.267
 OD1
 O
ASN C:159 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 ASN A:180 A:180 22.0 0.138 H -78.6 -38.9
af-p05014-f1 1 P05014 95.77 9e-135 ASN A:180 A:180 77.0 0.481 H -67.8 -44.1
af-p01566-f1 1 P01566 95.24 2e-134 ASN A:180 A:180 63.0 0.394 H -74.2 -42.3
af-p01567-f1 1 P01567 92.06 1e-128 ASN A:180 A:180 87.0 0.544 H -74.2 -35.0
af-p01568-f1 1 P01568 91.01 2e-127 ILE A:180 A:180 72.0 0.411 H -62.8 -41.0
af-p05015-f1 1 P05015 87.3 1e-122 ASN A:180 A:180 93.0 0.581 H -71.9 -39.3
af-p01569-f1 1 P01569 82.54 8e-119 ASN A:180 A:180 130.0 0.812 H -65.2 -41.8
af-p01570-f1 1 P01570 83.07 8e-118 ASN A:180 A:180 70.0 0.438 H -69.8 -43.2