Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227680 . C A CCDS6500.1:NM_021268.2:c.493Gag>Tag_NP_067091.1:p.165E>* Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 GLU B:141 A:141 1.0 0.005 H -60.0 -43.6 1.0 0.005 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 GLU A:141 D:141 6.0 0.032 H -68.0 -44.8 1.0 0.005 0.027 B:None:0.026
GLU D:141 E:141 6.0 0.032 H -68.3 -47.1 NA NA NA
GLU G:141 F:141 6.0 0.032 H -69.7 -45.1 NA NA NA
GLU J:141 G:141 5.0 0.026 H -70.1 -47.3 NA NA NA
GLU M:141 H:141 6.0 0.032 H -69.1 -44.0 NA NA NA
GLU P:141 I:141 5.0 0.026 H -68.5 -47.3 NA NA NA
GLU S:141 X:141 6.0 0.032 H -69.0 -45.6 NA NA NA
GLU V:141 N:141 5.0 0.026 H -68.7 -45.7 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 GLU A:142 A:141 18.0 0.095 H -59.4 -54.8 18.0 0.095 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 GLU A:142 A:142 21.0 0.111 H -65.8 -49.2 21.0 0.111 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 GLU C:143 C:141 3.0 0.016 H -64.9 -41.9 3.0 0.016 0.0
GLU D:143 D:141 3.0 0.016 H -65.6 -45.8 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 GLU B:142 B:141 4.0 0.021 H -66.9 -41.8 3.0 0.016 0.005 C:P48551:0.005
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 GLU A:144 A:141 4.0 0.021 H -64.8 -43.8 3.0 0.016 0.005 B:P48551:0.005
 HOH
 2.723
 OE2
 O
GLU C:144 C:141 3.0 0.016 H -55.9 -48.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 GLU A:165 A:165 6.0 0.032 H -64.3 -41.1
af-p05014-f1 1 P05014 95.77 9e-135 GLU A:165 A:165 5.0 0.026 H -64.4 -40.3
af-p01566-f1 1 P01566 95.24 2e-134 GLU A:165 A:165 6.0 0.032 H -64.0 -40.7
af-p01567-f1 1 P01567 92.06 1e-128 GLU A:165 A:165 5.0 0.026 H -63.8 -40.7
af-p01568-f1 1 P01568 91.01 2e-127 GLU A:165 A:165 4.0 0.021 H -64.8 -40.6
af-p05015-f1 1 P05015 87.3 1e-122 GLU A:165 A:165 4.0 0.021 H -64.4 -39.8
af-p01569-f1 1 P01569 82.54 8e-119 GLU A:165 A:165 5.0 0.026 H -64.8 -39.8
af-p01570-f1 1 P01570 83.07 8e-118 GLU A:165 A:165 3.0 0.016 H -65.2 -38.9