Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227748 . G A CCDS6500.1:NM_021268.2:c.425gCt>gTt_NP_067091.1:p.142A>V Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 ALA B:118 A:118 27.0 0.235 H -60.7 -42.0 27.0 0.235 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 ALA A:118 D:118 21.0 0.183 H -58.8 -44.3 21.0 0.183 0.0
ALA D:118 E:118 21.0 0.183 H -60.5 -44.3 NA NA NA
ALA G:118 F:118 20.0 0.174 H -58.5 -44.9 NA NA NA
ALA J:118 G:118 21.0 0.183 H -60.8 -42.3 NA NA NA
ALA M:118 H:118 20.0 0.174 H -59.2 -43.4 NA NA NA
ALA P:118 I:118 21.0 0.183 H -57.3 -45.4 NA NA NA
ALA S:118 X:118 21.0 0.183 H -58.7 -43.8 NA NA NA
ALA V:118 N:118 21.0 0.183 H -59.3 -43.1 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 ALA A:119 A:118 3.0 0.026 H -52.6 -59.6 3.0 0.026 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 ALA A:119 A:119 3.0 0.026 H -54.3 -36.5 3.0 0.026 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 ALA C:120 C:118 24.0 0.209 H -58.8 -55.2 24.0 0.209 0.0 HOH
 9.626
 N
 O
ALA D:120 D:118 22.0 0.191 H -52.3 -48.9 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 ALA B:119 B:118 34.0 0.296 H -65.2 -41.5 34.0 0.296 0.0
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 ALA A:121 A:118 23.0 0.2 H -68.4 -39.5 23.0 0.2 0.0 HOH
 2.705
 O
 O
ALA C:121 C:118 70.0 0.609 H -60.7 -30.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 ALA A:142 A:142 21.0 0.183 H -61.5 -44.1
af-p05014-f1 1 P05014 95.77 9e-135 ALA A:142 A:142 17.0 0.148 H -61.4 -45.8
af-p01566-f1 1 P01566 95.24 2e-134 ALA A:142 A:142 21.0 0.183 H -61.9 -44.2
af-p01567-f1 1 P01567 92.06 1e-128 ALA A:142 A:142 12.0 0.104 H -60.6 -44.5
af-p01568-f1 1 P01568 91.01 2e-127 ALA A:142 A:142 19.0 0.165 H -61.3 -45.3
af-p05015-f1 1 P05015 87.3 1e-122 ALA A:142 A:142 29.0 0.252 H -60.4 -44.3
af-p01569-f1 1 P01569 82.54 8e-119 THR A:142 A:142 42.0 0.3 H -61.0 -46.6
af-p01570-f1 1 P01570 83.07 8e-118 ALA A:142 A:142 19.0 0.165 H -60.5 -45.3