Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227821 . T A CCDS6500.1:NM_021268.2:c.352Aac>Tac_NP_067091.1:p.118N>Y Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 ASP B:94 A:94 57.0 0.38 H -67.0 -37.2 57.0 0.38 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 ASP A:94 D:94 87.0 0.58 H -66.5 -43.9 87.0 0.58 0.0
ASP D:94 E:94 89.0 0.593 H -67.3 -42.8 NA NA NA
ASP G:94 F:94 88.0 0.587 H -65.9 -43.5 NA NA NA
ASP J:94 G:94 88.0 0.587 H -65.2 -43.7 NA NA NA
ASP M:94 H:94 87.0 0.58 H -66.1 -43.8 NA NA NA
ASP P:94 I:94 88.0 0.587 H -67.5 -43.2 NA NA NA
ASP S:94 X:94 88.0 0.587 H -66.2 -42.4 NA NA NA
ASP V:94 N:94 87.0 0.58 H -66.0 -43.6 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 ASP A:95 A:94 94.0 0.627 H -69.4 -60.5 94.0 0.627 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 ASP A:95 A:95 83.0 0.553 H -60.0 -43.1 83.0 0.553 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 ASP C:96 C:94 24.0 0.16 H -77.3 -48.0 24.0 0.16 0.0 NI
HOH
 4.424
9.213
 OD1
O
 NI
O
ASP D:96 D:94 24.0 0.16 H -68.1 -48.1 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 ASP B:95 B:94 97.0 0.647 H -60.0 -40.2 97.0 0.647 0.0
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 ASP A:97 A:94 94.0 0.627 H -66.1 -28.8 94.0 0.627 0.0 HOH
 2.689
 OD1
 O
ASP C:97 C:94 100.0 0.667 H -60.7 -38.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 ASN A:118 A:118 44.0 0.275 H -68.4 -39.5
af-p05014-f1 1 P05014 95.77 9e-135 ASP A:118 A:118 21.0 0.14 H -63.1 -37.3
af-p01566-f1 1 P01566 95.24 2e-134 ASP A:118 A:118 20.0 0.133 H -63.4 -38.1
af-p01567-f1 1 P01567 92.06 1e-128 ASP A:118 A:118 23.0 0.153 H -64.0 -38.0
af-p01568-f1 1 P01568 91.01 2e-127 ASP A:118 A:118 58.0 0.387 H -63.9 -40.3
af-p05015-f1 1 P05015 87.3 1e-122 ASP A:118 A:118 57.0 0.38 H -64.9 -36.3
af-p01569-f1 1 P01569 82.54 8e-119 ASP A:118 A:118 18.0 0.12 H -62.0 -38.9
af-p01570-f1 1 P01570 83.07 8e-118 ASP A:118 A:118 44.0 0.293 H -63.1 -39.9