Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227824 . T A CCDS6500.1:NM_021268.2:c.349Aat>Tat_NP_067091.1:p.117N>Y Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 ASN B:93 A:93 88.0 0.55 H -65.5 -37.8 88.0 0.55 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 ASN A:93 D:93 86.0 0.537 H -69.3 -41.3 86.0 0.537 0.0
ASN D:93 E:93 87.0 0.544 H -68.9 -40.7 NA NA NA
ASN G:93 F:93 89.0 0.556 H -68.9 -41.5 NA NA NA
ASN J:93 G:93 88.0 0.55 H -68.8 -41.9 NA NA NA
ASN M:93 H:93 88.0 0.55 H -69.8 -40.8 NA NA NA
ASN P:93 I:93 89.0 0.556 H -69.0 -41.0 NA NA NA
ASN S:93 X:93 88.0 0.55 H -67.8 -42.1 NA NA NA
ASN V:93 N:93 88.0 0.55 H -69.3 -41.2 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 ASN A:94 A:93 77.0 0.481 H -55.2 -52.8 77.0 0.481 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 ASN A:94 A:94 102.0 0.637 H -61.3 -37.4 102.0 0.637 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 ASN C:95 C:93 87.0 0.544 H -54.3 -37.2 0.0 0.0 0.544 B:None:0.544
 NI
 6.115
 O
 NI
ASN D:95 D:93 84.0 0.525 H -62.7 -40.2 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 ASN B:94 B:93 53.0 0.331 H -57.0 -41.5 48.0 0.3 0.031 A:P17181:0.031
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 ASN A:96 A:93 60.0 0.375 H -57.5 -44.7 60.0 0.375 0.0 HOH
 2.899
 O
 O
ASN C:96 C:93 72.0 0.45 H -64.2 -42.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 ASN A:117 A:117 65.0 0.406 H -58.7 -38.5
af-p05014-f1 1 P05014 95.77 9e-135 ASN A:117 A:117 50.0 0.312 H -60.5 -42.2
af-p01566-f1 1 P01566 95.24 2e-134 ASN A:117 A:117 51.0 0.319 H -60.3 -42.1
af-p01567-f1 1 P01567 92.06 1e-128 ASN A:117 A:117 62.0 0.388 H -58.2 -39.2
af-p01568-f1 1 P01568 91.01 2e-127 ASN A:117 A:117 70.0 0.438 H -61.6 -42.1
af-p05015-f1 1 P05015 87.3 1e-122 ASN A:117 A:117 60.0 0.375 H -60.5 -41.3
af-p01569-f1 1 P01569 82.54 8e-119 ASN A:117 A:117 51.0 0.319 H -61.5 -42.4
af-p01570-f1 1 P01570 83.07 8e-118 ASN A:117 A:117 56.0 0.35 H -61.0 -41.5