Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21227873 . C A CCDS6500.1:NM_021268.2:c.300tgG>tgT_NP_067091.1:p.100W>C Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 TRP B:76 A:76 13.0 0.051 S -94.2 -168.7 13.0 0.051 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 TRP A:76 D:76 9.0 0.035 S -123.5 160.5 9.0 0.035 0.0
TRP D:76 E:76 10.0 0.039 S -125.8 160.0 NA NA NA
TRP G:76 F:76 11.0 0.043 S -123.1 161.6 NA NA NA
TRP J:76 G:76 10.0 0.039 S -124.6 161.7 NA NA NA
TRP M:76 H:76 10.0 0.039 S -125.7 161.0 NA NA NA
TRP P:76 I:76 10.0 0.039 S -125.5 161.5 NA NA NA
TRP S:76 X:76 9.0 0.035 S -125.9 160.7 NA NA NA
TRP V:76 N:76 9.0 0.035 S -125.5 161.0 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 TRP A:77 A:76 13.0 0.051 S -133.5 175.7 13.0 0.051 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 LEU A:77 A:77 14.0 0.082 S -104.9 152.8 14.0 0.082 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 TRP C:78 C:76 13.0 0.051 S -122.8 162.0 13.0 0.051 0.0
TRP D:78 D:76 11.0 0.043 S -126.8 160.1 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 TRP B:77 B:76 18.0 0.071 S -127.7 155.5 18.0 0.071 0.0
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 TRP A:79 A:76 6.0 0.024 S -125.5 155.9 6.0 0.024 0.0 HOH
 2.910
 O
 O
TRP C:79 C:76 6.0 0.024 S -116.5 156.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 TRP A:100 A:100 19.0 0.075 S -109.3 173.6
af-p05014-f1 1 P05014 95.77 9e-135 TRP A:100 A:100 19.0 0.075 S -109.1 166.2
af-p01566-f1 1 P01566 95.24 2e-134 TRP A:100 A:100 17.0 0.067 S -106.3 168.5
af-p01567-f1 1 P01567 92.06 1e-128 TRP A:100 A:100 17.0 0.067 S -110.4 166.5
af-p01568-f1 1 P01568 91.01 2e-127 TRP A:100 A:100 13.0 0.051 S -95.0 163.1
af-p05015-f1 1 P05015 87.3 1e-122 TRP A:100 A:100 15.0 0.059 S -109.3 173.9
af-p01569-f1 1 P01569 82.54 8e-119 TRP A:100 A:100 13.0 0.051 S -98.5 169.7
af-p01570-f1 1 P01570 83.07 8e-118 TRP A:100 A:100 10.0 0.039 S -121.9 169.5