Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21228027 . G A CCDS6500.1:NM_021268.2:c.146cCt>cTt_NP_067091.1:p.49P>L Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 LEU B:26 A:26 60.0 0.353 G -60.8 -32.3 0.0 0.0 0.353 A:P48551:0.353
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 LEU A:26 D:26 59.0 0.347 G -63.9 -19.5 9.0 0.053 0.294 B:None:0.294
C:None:0.024
LEU D:26 E:26 59.0 0.347 G -65.0 -18.8 NA NA NA
LEU G:26 F:26 57.0 0.335 G -64.4 -21.5 NA NA NA
LEU J:26 G:26 56.0 0.329 G -64.8 -21.2 NA NA NA
LEU M:26 H:26 59.0 0.347 G -65.9 -20.1 NA NA NA
LEU P:26 I:26 58.0 0.341 G -64.1 -21.2 NA NA NA
LEU S:26 X:26 58.0 0.341 G -64.6 -20.9 NA NA NA
LEU V:26 N:26 59.0 0.347 G -64.8 -20.2 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 LEU A:27 A:26 114.0 0.671 G -61.5 -22.5 114.0 0.671 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 PRO A:26 A:26 107.0 0.738 G -63.7 -16.7 107.0 0.738 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 LEU C:28 C:26 72.0 0.424 S -102.5 -37.2 72.0 0.424 0.0
LEU D:28 D:26 47.0 0.276 G -66.8 -26.0 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 LEU B:27 B:26 78.0 0.459 S -72.7 -30.1 6.0 0.035 0.424 C:P48551:0.424
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 LEU A:29 A:26 77.0 0.453 S -69.5 -30.4 2.0 0.012 0.441 B:P48551:0.441
 HOH
 2.866
 N
 O
LEU C:29 C:26 74.0 0.435 S -81.2 -15.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 PRO A:49 A:49 69.0 0.476 T -55.2 -25.8
af-p05014-f1 1 P05014 95.77 9e-135 HIS A:49 A:49 72.0 0.369 G -52.4 -29.9
af-p01566-f1 1 P01566 95.24 2e-134 PRO A:49 A:49 62.0 0.428 T -56.2 -22.9
af-p01567-f1 1 P01567 92.06 1e-128 PRO A:49 A:49 61.0 0.421 T -55.5 -23.9
af-p01568-f1 1 P01568 91.01 2e-127 PRO A:49 A:49 61.0 0.421 G -54.4 -27.8
af-p05015-f1 1 P05015 87.3 1e-122 HIS A:49 A:49 56.0 0.287 G -50.6 -32.4
af-p01569-f1 1 P01569 82.54 8e-119 PRO A:49 A:49 63.0 0.434 G -55.3 -25.9
af-p01570-f1 1 P01570 83.07 8e-118 PRO A:49 A:49 42.0 0.29 G -56.0 -24.9