Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21228064 . C A CCDS6500.1:NM_021268.2:c.109Gcc>Tcc_NP_067091.1:p.37A>S Homo sapiens interferon alpha 17 (IFNA17), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lag 2 P01563 81.33 5e-98 NMR
 2011-08-17 THR B:14 A:14 1.0 0.007 H -61.4 -34.5 1.0 0.007 0.0
4z5r 1 P01563 81.33 5e-98 X-RAY
 2015-07-08 THR A:14 D:14 3.0 0.021 H -66.4 -40.3 3.0 0.021 0.0
THR D:14 E:14 4.0 0.029 H -67.6 -39.1 NA NA NA
THR G:14 F:14 3.0 0.021 H -67.4 -40.2 NA NA NA
THR J:14 G:14 3.0 0.021 H -67.2 -39.2 NA NA NA
THR M:14 H:14 4.0 0.029 H -67.0 -40.7 NA NA NA
THR P:14 I:14 3.0 0.021 H -65.4 -39.5 NA NA NA
THR S:14 X:14 4.0 0.029 H -66.5 -40.7 NA NA NA
THR V:14 N:14 4.0 0.029 H -66.3 -39.6 NA NA NA
2lms 1 P01563 81.33 5e-98 NMR
 2012-12-05 THR A:15 A:14 25.0 0.179 H -59.2 -43.5 25.0 0.179 0.0
6jhd 1 P32881 81.33 3e-97 NMR
 2020-02-19 ALA A:14 A:14 4.0 0.035 S 80.4 -5.9 4.0 0.035 0.0
4ypg 3 P01563 81.99 3e-96 X-RAY
 2015-05-06 THR C:16 C:14 0.0 0.0 H -54.9 -58.9 0.0 0.0 0.0
THR D:16 D:14 1.0 0.007 H -51.0 -44.2 NA NA NA
3se3 2 Q86UP4 80.12 5e-96 X-RAY
 2011-08-31 THR B:15 B:14 1.0 0.007 H -81.3 -46.6 1.0 0.007 0.0
3s9d 1 P01563 80.12 4e-95 X-RAY
 2011-08-31 THR A:17 A:14 0.0 0.0 H -63.5 -47.3 0.0 0.0 0.0 HOH
 4.712
 OG1
 O
THR C:17 C:14 0.0 0.0 H -63.0 -45.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01571-f1 1 P01571 100.0 1e-141 ALA A:37 A:37 0.0 0.0 H -56.5 -46.2
af-p05014-f1 1 P05014 95.77 9e-135 ALA A:37 A:37 0.0 0.0 H -55.9 -46.1
af-p01566-f1 1 P01566 95.24 2e-134 ALA A:37 A:37 0.0 0.0 H -56.2 -45.9
af-p01567-f1 1 P01567 92.06 1e-128 ALA A:37 A:37 0.0 0.0 H -55.7 -45.4
af-p01568-f1 1 P01568 91.01 2e-127 ALA A:37 A:37 0.0 0.0 H -55.8 -46.2
af-p05015-f1 1 P05015 87.3 1e-122 ALA A:37 A:37 0.0 0.0 H -55.3 -45.8
af-p01569-f1 1 P01569 82.54 8e-119 THR A:37 A:37 0.0 0.0 H -54.0 -50.0
af-p01570-f1 1 P01570 83.07 8e-118 THR A:37 A:37 2.0 0.014 H -56.9 -46.8