Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21305059 . A C CCDS6502.1:NM_002169.2:c.197tTt>tGt_NP_002160.1:p.66F>C Homo sapiens interferon alpha 5 (IFNA5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 84.02 1e-104 X-RAY
 2012-02-29 PHE A:46 A:43 9.0 0.043 G -114.3 9.7 9.0 0.043 0.0 HOH
 8.621
 CE2
 O
PHE C:46 C:43 46.0 0.219 -115.2 360.0 NA NA NA
2lms 1 P01563 84.94 1e-102 NMR
 2012-12-05 PHE A:44 A:43 16.0 0.076 H -78.2 -18.8 16.0 0.076 0.0
2lag 2 P01563 84.94 1e-102 NMR
 2011-08-17 PHE B:43 A:43 4.0 0.019 H -130.5 -61.1 4.0 0.019 0.0
4z5r 1 P01563 84.94 1e-102 X-RAY
 2015-07-08 PHE A:43 D:43 6.0 0.029 S -115.5 -106.7 6.0 0.029 0.0
PHE D:43 E:43 5.0 0.024 S -115.5 -104.6 NA NA NA
PHE G:43 F:43 6.0 0.029 -115.4 -110.0 NA NA NA
PHE J:43 G:43 10.0 0.048 S -115.7 -103.9 NA NA NA
PHE M:43 H:43 6.0 0.029 S -116.1 -102.4 NA NA NA
PHE P:43 I:43 6.0 0.029 S -114.8 -107.5 NA NA NA
PHE S:43 X:43 48.0 0.229 -117.2 360.0 NA NA NA
PHE V:43 N:43 4.0 0.019 S -113.8 -101.5 NA NA NA
6jhd 1 P32881 83.73 6e-101 NMR
 2020-02-19 PHE A:43 A:43 3.0 0.014 H -89.8 2.1 3.0 0.014 0.0
3se3 2 Q86UP4 83.73 2e-100 X-RAY
 2011-08-31 PHE B:44 B:43 72.0 0.343 -118.1 360.0 72.0 0.343 0.0
4ypg 3 P01563 85.09 6e-100 X-RAY
 2015-05-06 PHE C:45 C:43 8.0 0.038 S -167.4 -171.5 8.0 0.038 0.0
PHE D:45 D:43 13.0 0.062 S -138.0 -176.0 NA NA NA
3s9d 1 P01563 83.73 9e-100 X-RAY
 2011-08-31 PHE A:46 A:43 74.0 0.352 -125.0 360.0 74.0 0.352 0.0 HOH
 9.018
 CD2
 O
PHE C:46 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01569-f1 1 P01569 100.0 4e-143 PHE A:66 A:66 8.0 0.038 G -109.6 1.1
af-p01568-f1 1 P01568 86.77 5e-124 PHE A:66 A:66 4.0 0.019 G -107.8 5.7
af-p01570-f1 1 P01570 84.66 5e-122 PHE A:66 A:66 2.0 0.01 G -108.8 -2.6
af-p05014-f1 1 P05014 83.6 4e-120 PHE A:66 A:66 3.0 0.014 G -110.9 3.3
af-p05013-f1 1 P05013 86.24 5e-120 PHE A:66 A:66 0.0 0.0 H -105.7 -14.3
af-p01571-f1 1 P01571 82.54 8e-119 PHE A:66 A:66 0.0 0.0 H -79.5 -30.8
af-p01566-f1 1 P01566 82.54 1e-118 PHE A:66 A:66 0.0 0.0 H -78.8 -28.2
af-p01562-f1 1 P01562 84.13 2e-118 PHE A:66 A:66 2.0 0.01 T -113.8 -8.8
af-p05015-f1 1 P05015 82.54 9e-117 PHE A:66 A:66 7.0 0.033 H -101.5 3.7
af-p32881-f1 1 P32881 82.01 3e-112 PHE A:66 A:66 1.0 0.005 H -94.0 -24.4
af-p01563-f1 1 P01563 83.07 3e-110 PHE A:66 A:66 1.0 0.005 G -111.5 -2.7