Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21305071 . G A CCDS6502.1:NM_002169.2:c.185cCt>cTt_NP_002160.1:p.62P>L Homo sapiens interferon alpha 5 (IFNA5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 84.02 1e-104 X-RAY
 2012-02-29 PRO A:42 A:39 5.0 0.034 -80.9 65.7 5.0 0.034 0.0 HOH
 3.103
 CG
 O
PRO C:42 C:39 5.0 0.034 -79.9 64.9 NA NA NA
2lms 1 P01563 84.94 1e-102 NMR
 2012-12-05 PRO A:40 A:39 35.0 0.241 -69.8 81.2 35.0 0.241 0.0
2lag 2 P01563 84.94 1e-102 NMR
 2011-08-17 PRO B:39 A:39 21.0 0.145 -79.2 102.6 21.0 0.145 0.0
4z5r 1 P01563 84.94 1e-102 X-RAY
 2015-07-08 PRO A:39 D:39 8.0 0.055 -78.3 72.8 8.0 0.055 0.0
PRO D:39 E:39 9.0 0.062 -76.7 73.3 NA NA NA
PRO G:39 F:39 10.0 0.069 -77.8 74.7 NA NA NA
PRO J:39 G:39 9.0 0.062 -79.0 74.2 NA NA NA
PRO M:39 H:39 10.0 0.069 -77.2 73.7 NA NA NA
PRO P:39 I:39 9.0 0.062 -78.6 74.0 NA NA NA
PRO S:39 X:39 10.0 0.069 -77.2 74.3 NA NA NA
PRO V:39 N:39 10.0 0.069 -78.4 72.1 NA NA NA
6jhd 1 P32881 83.73 6e-101 NMR
 2020-02-19 PRO A:39 A:39 0.0 0.0 -67.6 103.1 0.0 0.0 0.0
3se3 2 Q86UP4 83.73 2e-100 X-RAY
 2011-08-31 PRO B:40 B:39 12.0 0.083 -79.7 72.0 12.0 0.083 0.0
4ypg 3 P01563 85.09 6e-100 X-RAY
 2015-05-06 PRO C:41 C:39 12.0 0.083 -90.0 90.1 12.0 0.083 0.0
PRO D:41 D:39 9.0 0.062 -81.6 85.1 NA NA NA
3s9d 1 P01563 83.73 9e-100 X-RAY
 2011-08-31 PRO A:42 A:39 10.0 0.069 -81.7 74.1 10.0 0.069 0.0 HOH
 4.114
 CG
 O
PRO C:42 C:39 62.0 0.428 -64.3 56.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01569-f1 1 P01569 100.0 4e-143 PRO A:62 A:62 16.0 0.11 -80.6 71.6
af-p01568-f1 1 P01568 86.77 5e-124 PRO A:62 A:62 13.0 0.09 -73.0 71.8
af-p01570-f1 1 P01570 84.66 5e-122 PRO A:62 A:62 14.0 0.097 -73.0 75.2
af-p05014-f1 1 P05014 83.6 4e-120 PRO A:62 A:62 15.0 0.103 -73.1 73.7
af-p05013-f1 1 P05013 86.24 5e-120 PRO A:62 A:62 16.0 0.11 -78.5 80.4
af-p01571-f1 1 P01571 82.54 8e-119 PRO A:62 A:62 18.0 0.124 -72.7 80.4
af-p01566-f1 1 P01566 82.54 1e-118 PRO A:62 A:62 16.0 0.11 -74.6 79.6
af-p01562-f1 1 P01562 84.13 2e-118 PRO A:62 A:62 20.0 0.138 -76.7 66.5
af-p05015-f1 1 P05015 82.54 9e-117 PRO A:62 A:62 19.0 0.131 -75.8 68.9
af-p32881-f1 1 P32881 82.01 3e-112 PRO A:62 A:62 19.0 0.131 -75.4 62.7
af-p01563-f1 1 P01563 83.07 3e-110 PRO A:62 A:62 6.0 0.041 -79.0 71.8