Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21305104 . G A CCDS6502.1:NM_002169.2:c.152tCc>tTc_NP_002160.1:p.51S>F Homo sapiens interferon alpha 5 (IFNA5), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 84.02 1e-104 X-RAY
 2012-02-29 SER A:31 A:28 86.0 0.748 G -105.7 -9.4 38.0 0.33 0.418 B:None:0.417
SER C:31 C:28 89.0 0.774 G -103.0 -7.2 NA NA NA
2lms 1 P01563 84.94 1e-102 NMR
 2012-12-05 SER A:29 A:28 58.0 0.504 G -67.4 -30.9 58.0 0.504 0.0
2lag 2 P01563 84.94 1e-102 NMR
 2011-08-17 SER B:28 A:28 83.0 0.722 G -70.9 -21.0 70.0 0.609 0.113 A:P48551:0.113
4z5r 1 P01563 84.94 1e-102 X-RAY
 2015-07-08 SER A:28 D:28 88.0 0.765 G -87.7 -6.4 88.0 0.765 0.0
SER D:28 E:28 88.0 0.765 G -89.1 -6.7 NA NA NA
SER G:28 F:28 89.0 0.774 G -88.6 -6.8 NA NA NA
SER J:28 G:28 88.0 0.765 G -88.5 -5.5 NA NA NA
SER M:28 H:28 90.0 0.783 G -87.5 -7.3 NA NA NA
SER P:28 I:28 91.0 0.791 G -87.1 -7.8 NA NA NA
SER S:28 X:28 89.0 0.774 G -88.1 -6.8 NA NA NA
SER V:28 N:28 89.0 0.774 G -86.7 -6.5 NA NA NA
6jhd 1 P32881 83.73 6e-101 NMR
 2020-02-19 SER A:28 A:28 52.0 0.452 G -67.7 -42.3 52.0 0.452 0.0
3se3 2 Q86UP4 83.73 2e-100 X-RAY
 2011-08-31 SER B:29 B:28 77.0 0.67 G -80.1 -3.6 77.0 0.67 0.0
4ypg 3 P01563 85.09 6e-100 X-RAY
 2015-05-06 SER C:30 C:28 68.0 0.591 S -69.8 -40.8 68.0 0.591 0.0
SER D:30 D:28 94.0 0.817 G -80.1 -31.8 NA NA NA
3s9d 1 P01563 83.73 9e-100 X-RAY
 2011-08-31 SER A:31 A:28 68.0 0.591 G -76.3 -5.2 68.0 0.591 0.0 HOH
 3.301
 O
 O
SER C:31 C:28 60.0 0.522 G -63.1 -9.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01569-f1 1 P01569 100.0 4e-143 SER A:51 A:51 87.0 0.757 G -77.3 -20.2
af-p01568-f1 1 P01568 86.77 5e-124 SER A:51 A:51 88.0 0.765 G -75.3 -21.2
af-p01570-f1 1 P01570 84.66 5e-122 SER A:51 A:51 89.0 0.774 G -76.1 -19.6
af-p05014-f1 1 P05014 83.6 4e-120 SER A:51 A:51 88.0 0.765 G -76.6 -23.3
af-p05013-f1 1 P05013 86.24 5e-120 SER A:51 A:51 89.0 0.774 T -79.1 -19.1
af-p01571-f1 1 P01571 82.54 8e-119 SER A:51 A:51 89.0 0.774 T -75.8 -23.0
af-p01566-f1 1 P01566 82.54 1e-118 SER A:51 A:51 89.0 0.774 T -76.0 -23.1
af-p01562-f1 1 P01562 84.13 2e-118 SER A:51 A:51 78.0 0.678 G -76.9 -16.3
af-p05015-f1 1 P05015 82.54 9e-117 SER A:51 A:51 88.0 0.765 G -73.7 -22.7
af-p32881-f1 1 P32881 82.01 3e-112 SER A:51 A:51 81.0 0.704 G -75.8 -18.7
af-p01563-f1 1 P01563 83.07 3e-110 SER A:51 A:51 90.0 0.783 T -78.0 -20.4