Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350467 . G A CCDS6504.1:NM_021002.2:c.420atC>atT_NP_066282.1:p.140I>I Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 ILE A:117 A:116 41.0 0.234 H -58.8 -35.5 41.0 0.234 0.0
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 ILE B:116 A:116 25.0 0.143 H -63.4 -44.6 25.0 0.143 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 ILE A:116 D:116 38.0 0.217 H -63.5 -44.8 38.0 0.217 0.0
ILE D:116 E:116 38.0 0.217 H -62.8 -43.6 NA NA NA
ILE G:116 F:116 38.0 0.217 H -64.2 -43.9 NA NA NA
ILE J:116 G:116 44.0 0.251 H -61.8 -45.7 NA NA NA
ILE M:116 H:116 38.0 0.217 H -62.7 -44.7 NA NA NA
ILE P:116 I:116 37.0 0.211 H -62.8 -44.6 NA NA NA
ILE S:116 X:116 37.0 0.211 H -63.1 -43.5 NA NA NA
ILE V:116 N:116 38.0 0.217 H -63.0 -43.7 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 ILE B:117 B:116 62.0 0.354 H -64.7 -35.1 23.0 0.131 0.223 A:P17181:0.223
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 ILE A:120 A:117 36.0 0.206 H -57.4 -26.7 36.0 0.206 0.0 HOH
 7.770
 O
 O
ILE C:120 C:117 35.0 0.2 H -59.1 -26.3 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 ILE A:119 A:116 59.0 0.337 H -51.5 -35.0 59.0 0.337 0.0 HOH
 7.121
 O
 O
ILE C:119 NA:NA DO NA DO DO DO NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 ILE C:118 C:116 18.0 0.103 H -60.3 -51.9 0.0 0.0 0.103 A:Q6PJF2:0.103
 HOH
 6.916
 CG2
 O
ILE D:118 D:116 16.0 0.091 H -72.1 -45.8 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 ILE A:117 A:117 54.0 0.309 H -67.8 -49.3 54.0 0.309 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 ILE A:140 A:140 16.0 0.091 H -59.6 -44.5
af-p01569-f1 1 P01569 86.24 5e-120 ILE A:140 A:140 15.0 0.086 H -59.4 -45.2
af-p01570-f1 1 P01570 83.07 6e-117 ILE A:140 A:140 18.0 0.103 H -61.2 -43.0
af-p01562-f1 1 P01562 84.66 1e-114 ILE A:140 A:140 32.0 0.183 H -58.4 -43.9
af-p05014-f1 1 P05014 81.48 3e-112 ILE A:140 A:140 7.0 0.04 H -60.6 -43.1
af-p01566-f1 1 P01566 80.95 9e-112 ILE A:140 A:140 17.0 0.097 H -60.8 -43.1
af-p01568-f1 1 P01568 81.48 2e-111 ILE A:140 A:140 18.0 0.103 H -60.2 -42.9
af-p01563-f1 1 P01563 85.19 1e-109 ILE A:139 A:139 21.0 0.12 H -60.3 -43.0
af-p32881-f1 1 P32881 80.95 3e-107 ILE A:140 A:140 31.0 0.177 H -61.4 -43.3