Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350522 . C A CCDS6504.1:NM_021002.2:c.365tGt>tTt_NP_066282.1:p.122C>F Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 CYS A:99 A:98 46.0 0.341 H -73.9 -55.8 46.0 0.341 0.0 A2G
 9.840
 O
 H82
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 CYS B:98 A:98 3.0 0.022 H -71.7 -22.4 3.0 0.022 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 CYS A:98 D:98 58.0 0.43 H -74.1 -47.4 58.0 0.43 0.0
CYS D:98 E:98 57.0 0.422 H -74.1 -46.3 NA NA NA
CYS G:98 F:98 52.0 0.385 H -72.3 -47.1 NA NA NA
CYS J:98 G:98 63.0 0.467 H -72.5 -46.9 NA NA NA
CYS M:98 H:98 45.0 0.333 H -72.5 -48.3 NA NA NA
CYS P:98 I:98 47.0 0.348 H -72.3 -48.9 NA NA NA
CYS S:98 X:98 52.0 0.385 H -72.5 -47.9 NA NA NA
CYS V:98 N:98 70.0 0.519 H -72.4 -49.0 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 CYS B:99 B:98 97.0 0.719 -54.4 118.4 97.0 0.719 0.0
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 CYS A:102 A:99 76.0 0.563 H -65.6 -12.5 76.0 0.563 0.0
CYS C:102 C:99 76.0 0.563 H -65.2 -13.6 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 CYS A:101 A:98 128.0 0.948 -72.9 360.0 128.0 0.948 0.0 HOH
 6.824
 N
 O
CYS C:101 NA:NA DO NA DO DO DO NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 CYS C:100 C:98 1.0 0.007 H -59.1 -44.9 1.0 0.007 0.0 NI
HOH
 5.427
6.746
 SG
O
 NI
O
CYS D:100 D:98 2.0 0.015 H -58.1 -50.2 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 CYS A:99 A:99 7.0 0.052 H -64.7 -33.8 7.0 0.052 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 CYS A:122 A:122 1.0 0.007 H -72.3 -45.4
af-p01569-f1 1 P01569 86.24 5e-120 CYS A:122 A:122 1.0 0.007 H -70.5 -43.5
af-p01570-f1 1 P01570 83.07 6e-117 CYS A:122 A:122 10.0 0.074 H -70.8 -40.6
af-p01562-f1 1 P01562 84.66 1e-114 CYS A:122 A:122 1.0 0.007 H -69.8 -47.8
af-p05014-f1 1 P05014 81.48 3e-112 CYS A:122 A:122 1.0 0.007 H -76.5 -41.0
af-p01566-f1 1 P01566 80.95 9e-112 CYS A:122 A:122 1.0 0.007 H -74.9 -42.0
af-p01568-f1 1 P01568 81.48 2e-111 CYS A:122 A:122 11.0 0.081 H -64.5 -44.9
af-p01563-f1 1 P01563 85.19 1e-109 CYS A:121 A:121 6.0 0.044 H -74.9 -38.6
af-p32881-f1 1 P32881 80.95 3e-107 CYS A:122 A:122 0.0 0.0 H -74.7 -45.8