Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350591 . G A CCDS6504.1:NM_021002.2:c.296gCt>gTt_NP_066282.1:p.99A>V Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 ALA A:76 A:75 40.0 0.348 H -91.7 -36.2 40.0 0.348 0.0
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 ALA B:75 A:75 30.0 0.261 H -97.8 -40.9 30.0 0.261 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 ALA A:75 D:75 18.0 0.157 H -84.8 -36.0 18.0 0.157 0.0
ALA D:75 E:75 18.0 0.157 H -83.6 -34.4 NA NA NA
ALA G:75 F:75 18.0 0.157 H -84.9 -35.3 NA NA NA
ALA J:75 G:75 18.0 0.157 H -85.1 -35.2 NA NA NA
ALA M:75 H:75 17.0 0.148 H -84.4 -34.8 NA NA NA
ALA P:75 I:75 18.0 0.157 H -84.5 -34.6 NA NA NA
ALA S:75 X:75 16.0 0.139 H -85.3 -34.3 NA NA NA
ALA V:75 N:75 18.0 0.157 H -84.6 -34.3 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 ALA B:76 B:75 29.0 0.252 H -83.1 -27.6 29.0 0.252 0.0
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 ALA A:79 A:76 18.0 0.157 H -85.9 -35.8 18.0 0.157 0.0
ALA C:79 C:76 18.0 0.157 H -82.0 -36.7 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 ALA A:78 A:75 18.0 0.157 H -86.4 -26.6 18.0 0.157 0.0 HOH
 2.920
 O
 O
ALA C:78 C:75 18.0 0.157 H -90.0 -38.2 NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 ALA C:77 C:75 21.0 0.183 H -68.1 -35.4 21.0 0.183 0.0
ALA D:77 D:75 18.0 0.157 H -65.9 -38.7 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 ALA A:76 A:76 47.0 0.409 G -77.4 -35.4 47.0 0.409 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 ALA A:99 A:99 17.0 0.148 H -76.4 -23.7
af-p01569-f1 1 P01569 86.24 5e-120 THR A:99 A:99 33.0 0.236 H -92.2 -42.3
af-p01570-f1 1 P01570 83.07 6e-117 ALA A:99 A:99 17.0 0.148 H -83.1 -22.8
af-p01562-f1 1 P01562 84.66 1e-114 ALA A:99 A:99 16.0 0.139 H -82.6 -29.0
af-p05014-f1 1 P05014 81.48 3e-112 ALA A:99 A:99 25.0 0.217 H -81.8 -36.5
af-p01566-f1 1 P01566 80.95 9e-112 ALA A:99 A:99 24.0 0.209 H -81.1 -37.5
af-p01568-f1 1 P01568 81.48 2e-111 THR A:99 A:99 29.0 0.207 H -92.2 -44.6
af-p01563-f1 1 P01563 85.19 1e-109 ALA A:98 A:98 18.0 0.157 H -81.8 -29.0
af-p32881-f1 1 P32881 80.95 3e-107 ALA A:99 A:99 22.0 0.191 H -90.0 -29.7