Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350603 . T A CCDS6504.1:NM_021002.2:c.284gAc>gTc_NP_066282.1:p.95D>V Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 ASP A:72 A:71 64.0 0.427 H -51.8 -42.8 64.0 0.427 0.0
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 ASP B:71 A:71 68.0 0.453 H -70.9 -57.2 68.0 0.453 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 ASP A:71 D:71 59.0 0.393 H -67.8 -37.9 59.0 0.393 0.0
ASP D:71 E:71 59.0 0.393 H -68.5 -37.0 NA NA NA
ASP G:71 F:71 58.0 0.387 H -68.4 -37.0 NA NA NA
ASP J:71 G:71 57.0 0.38 H -67.6 -37.2 NA NA NA
ASP M:71 H:71 59.0 0.393 H -67.1 -38.4 NA NA NA
ASP P:71 I:71 60.0 0.4 H -67.6 -38.2 NA NA NA
ASP S:71 X:71 60.0 0.4 H -67.8 -37.1 NA NA NA
ASP V:71 N:71 58.0 0.387 H -67.8 -38.2 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 ASP B:72 B:71 75.0 0.5 H -70.2 -43.0 75.0 0.5 0.0
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 ASP A:75 A:72 73.0 0.487 H -53.1 -48.4 73.0 0.487 0.0
ASP C:75 C:72 72.0 0.48 H -53.4 -47.2 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 ASP A:74 A:71 36.0 0.24 H -70.7 -41.7 36.0 0.24 0.0 HOH
 2.484
 OD2
 O
ASP C:74 C:71 65.0 0.433 H -68.1 -40.9 NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 ASP C:73 C:71 65.0 0.433 H -65.2 -48.7 65.0 0.433 0.0
ASP D:73 D:71 59.0 0.393 H -58.9 -48.8 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 ASP A:72 A:72 84.0 0.56 T -56.9 -69.9 84.0 0.56 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 ASP A:95 A:95 65.0 0.433 H -62.7 -37.7
af-p01569-f1 1 P01569 86.24 5e-120 ASP A:95 A:95 67.0 0.447 H -64.6 -36.8
af-p01570-f1 1 P01570 83.07 6e-117 ASN A:95 A:95 67.0 0.419 H -66.6 -36.4
af-p01562-f1 1 P01562 84.66 1e-114 ASP A:95 A:95 68.0 0.453 H -67.4 -37.4
af-p05014-f1 1 P05014 81.48 3e-112 ASP A:95 A:95 66.0 0.44 H -62.1 -39.1
af-p01566-f1 1 P01566 80.95 9e-112 ASP A:95 A:95 65.0 0.433 H -61.4 -39.1
af-p01568-f1 1 P01568 81.48 2e-111 ASP A:95 A:95 65.0 0.433 H -66.5 -37.2
af-p01563-f1 1 P01563 85.19 1e-109 ASP A:94 A:94 66.0 0.44 H -64.8 -39.9
af-p32881-f1 1 P32881 80.95 3e-107 ASP A:95 A:95 67.0 0.447 H -67.1 -29.6