Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350663 . T A CCDS6504.1:NM_021002.2:c.224gAa>gTa_NP_066282.1:p.75E>V Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 GLU A:52 A:51 30.0 0.158 T -101.2 -6.6 30.0 0.158 0.0 A2G
 7.289
 OE2
 H1
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 GLU B:51 A:51 64.0 0.337 T -59.0 -26.3 64.0 0.337 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 GLU A:51 D:51 121.0 0.637 T -79.1 -4.6 121.0 0.637 0.0
GLU D:51 E:51 140.0 0.737 T -78.2 -5.3 NA NA NA
GLU G:51 F:51 143.0 0.753 T -78.5 -4.3 NA NA NA
GLU J:51 G:51 170.0 0.895 T -77.7 -5.2 NA NA NA
GLU M:51 H:51 174.0 0.916 T -77.4 -6.0 NA NA NA
GLU P:51 I:51 193.0 1.0 T -79.6 -4.3 NA NA NA
GLU S:51 X:51 174.0 0.916 T -78.4 -6.1 NA NA NA
GLU V:51 N:51 125.0 0.658 T -78.4 -5.2 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 GLU B:52 B:51 152.0 NA 360.0 -68.0 152.0 NA NA
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 PRO A:55 A:52 47.0 0.324 -78.2 120.5 47.0 0.324 0.0
PRO C:55 C:52 106.0 0.731 360.0 122.1 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 GLU A:54 A:51 132.0 NA 360.0 -85.0 132.0 NA NA
GLU C:54 NA:NA DO NA DO DO DO NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 GLU C:53 C:51 89.0 0.468 T -69.9 -25.4 89.0 0.468 0.0 HOH
 7.805
 N
 O
GLU D:53 D:51 84.0 0.442 T -86.5 -46.7 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 GLN A:52 A:52 65.0 0.361 H -56.6 -41.0 65.0 0.361 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 GLU A:75 A:75 31.0 0.163 H -66.9 -41.8
af-p01569-f1 1 P01569 86.24 5e-120 GLN A:75 A:75 31.0 0.172 H -67.7 -43.4
af-p01570-f1 1 P01570 83.07 6e-117 GLN A:75 A:75 33.0 0.183 H -63.8 -41.7
af-p01562-f1 1 P01562 84.66 1e-114 PRO A:75 A:75 31.0 0.214 H -53.2 -39.6
af-p05014-f1 1 P05014 81.48 3e-112 GLN A:75 A:75 34.0 0.189 H -66.7 -40.4
af-p01566-f1 1 P01566 80.95 9e-112 GLN A:75 A:75 35.0 0.194 H -63.5 -40.5
af-p01568-f1 1 P01568 81.48 2e-111 GLN A:75 A:75 28.0 0.156 H -66.4 -40.4
af-p01563-f1 1 P01563 85.19 1e-109 GLU A:74 A:74 26.0 0.137 H -87.8 -30.4
af-p32881-f1 1 P32881 80.95 3e-107 GLN A:75 A:75 9.0 0.05 H -65.3 -42.3