Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350709 . T A CCDS6504.1:NM_021002.2:c.178Aga>Tga_NP_066282.1:p.60R>* Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 GLY A:38 A:37 68.0 0.907 -64.8 87.7 68.0 0.907 0.0
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 GLY B:37 A:37 32.0 0.427 77.0 63.6 32.0 0.427 0.0
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 GLY A:37 D:37 37.0 0.493 58.9 59.5 7.0 0.093 0.4 C:None:0.4
GLY D:37 E:37 38.0 0.507 58.5 59.0 NA NA NA
GLY G:37 F:37 39.0 0.52 56.2 60.7 NA NA NA
GLY J:37 G:37 39.0 0.52 57.0 58.4 NA NA NA
GLY M:37 H:37 38.0 0.507 57.7 59.9 NA NA NA
GLY P:37 I:37 38.0 0.507 57.2 59.7 NA NA NA
GLY S:37 X:37 39.0 0.52 58.1 59.6 NA NA NA
GLY V:37 N:37 37.0 0.493 58.5 60.9 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 GLY B:38 B:37 43.0 0.573 51.0 52.4 43.0 0.573 0.0
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 GLY A:40 A:37 38.0 0.507 73.9 34.8 38.0 0.507 0.0 HOH
 4.211
 O
 O
GLY C:40 C:37 38.0 0.507 73.3 36.0 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 GLY A:40 A:37 36.0 0.48 53.3 51.7 36.0 0.48 0.0 HOH
 3.338
 N
 O
GLY C:40 C:37 39.0 0.52 66.9 46.6 NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 GLY C:39 C:37 33.0 0.44 47.9 60.5 33.0 0.44 0.0
GLY D:39 D:37 35.0 0.467 48.2 51.3 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 GLU A:37 A:37 0.0 0.0 S -79.0 -65.6 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 ARG A:60 A:60 182.0 0.809 53.9 65.9
af-p01569-f1 1 P01569 86.24 5e-120 GLY A:60 A:60 32.0 0.427 62.3 64.9
af-p01570-f1 1 P01570 83.07 6e-117 GLU A:60 A:60 121.0 0.637 55.5 57.4
af-p01562-f1 1 P01562 84.66 1e-114 GLY A:60 A:60 30.0 0.4 61.8 58.5
af-p05014-f1 1 P05014 81.48 3e-112 GLY A:60 A:60 32.0 0.427 60.8 65.5
af-p01566-f1 1 P01566 80.95 9e-112 ARG A:60 A:60 179.0 0.796 51.1 65.8
af-p01568-f1 1 P01568 81.48 2e-111 GLY A:60 A:60 31.0 0.413 62.0 66.1
af-p01563-f1 1 P01563 85.19 1e-109 GLY A:60 A:60 26.0 0.347 60.9 62.6
af-p32881-f1 1 P32881 80.95 3e-107 GLU A:60 A:60 121.0 0.637 55.3 61.7