Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21350741 . A C CCDS6504.1:NM_021002.2:c.146cTt>cGt_NP_066282.1:p.49L>R Homo sapiens interferon alpha 6 (IFNA6), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 86.14 8e-102 NMR
 2012-12-05 LEU A:27 A:26 114.0 0.671 G -61.5 -22.5 114.0 0.671 0.0
2lag 2 P01563 86.14 9e-102 NMR
 2011-08-17 LEU B:26 A:26 60.0 0.353 G -60.8 -32.3 0.0 0.0 0.353 A:P48551:0.353
4z5r 1 P01563 86.14 9e-102 X-RAY
 2015-07-08 LEU A:26 D:26 59.0 0.347 G -63.9 -19.5 9.0 0.053 0.294 B:None:0.294
C:None:0.024
LEU D:26 E:26 59.0 0.347 G -65.0 -18.8 NA NA NA
LEU G:26 F:26 57.0 0.335 G -64.4 -21.5 NA NA NA
LEU J:26 G:26 56.0 0.329 G -64.8 -21.2 NA NA NA
LEU M:26 H:26 59.0 0.347 G -65.9 -20.1 NA NA NA
LEU P:26 I:26 58.0 0.341 G -64.1 -21.2 NA NA NA
LEU S:26 X:26 58.0 0.341 G -64.6 -20.9 NA NA NA
LEU V:26 N:26 59.0 0.347 G -64.8 -20.2 NA NA NA
3se3 2 Q86UP4 84.94 7e-100 X-RAY
 2011-08-31 LEU B:27 B:26 78.0 0.459 S -72.7 -30.1 6.0 0.035 0.424 C:P48551:0.424
3ux9 1 P01562 84.34 7e-100 X-RAY
 2012-02-29 PRO A:29 A:26 71.0 0.49 G -54.1 -23.0 14.0 0.097 0.393 B:None:0.393
PRO C:29 C:26 72.0 0.497 G -57.1 -23.8 NA NA NA
3s9d 1 P01563 84.94 3e-99 X-RAY
 2011-08-31 LEU A:29 A:26 77.0 0.453 S -69.5 -30.4 2.0 0.012 0.441 B:P48551:0.441
 HOH
 2.866
 N
 O
LEU C:29 C:26 74.0 0.435 S -81.2 -15.2 NA NA NA
4ypg 3 P01563 86.88 3e-99 X-RAY
 2015-05-06 LEU C:28 C:26 72.0 0.424 S -102.5 -37.2 72.0 0.424 0.0
LEU D:28 D:26 47.0 0.276 G -66.8 -26.0 NA NA NA
6jhd 1 P32881 82.53 3e-97 NMR
 2020-02-19 PRO A:26 A:26 107.0 0.738 G -63.7 -16.7 107.0 0.738 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p05013-f1 1 P05013 100.0 5e-142 LEU A:49 A:49 58.0 0.341 T -60.4 -21.9
af-p01569-f1 1 P01569 86.24 5e-120 PRO A:49 A:49 63.0 0.434 G -55.3 -25.9
af-p01570-f1 1 P01570 83.07 6e-117 PRO A:49 A:49 42.0 0.29 G -56.0 -24.9
af-p01562-f1 1 P01562 84.66 1e-114 PRO A:49 A:49 71.0 0.49 G -56.3 -27.7
af-p05014-f1 1 P05014 81.48 3e-112 HIS A:49 A:49 72.0 0.369 G -52.4 -29.9
af-p01566-f1 1 P01566 80.95 9e-112 PRO A:49 A:49 62.0 0.428 T -56.2 -22.9
af-p01568-f1 1 P01568 81.48 2e-111 PRO A:49 A:49 61.0 0.421 G -54.4 -27.8
af-p01563-f1 1 P01563 85.19 1e-109 LEU A:49 A:49 54.0 0.318 T -61.0 -20.2
af-p32881-f1 1 P32881 80.95 3e-107 PRO A:49 A:49 50.0 0.345 G -57.4 -25.4