Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21367480 . G A CCDS6505.2:NM_006900.3:c.530tCt>tTt_NP_008831.3:p.177S>F Homo sapiens interferon alpha 13 (IFNA13), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 SER A:156 A:153 59.0 0.513 H -72.0 -23.2 59.0 0.513 0.0
SER C:156 C:153 60.0 0.522 H -68.8 -22.8 NA NA NA
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 SER B:152 A:152 32.0 0.278 H -59.4 -47.2 0.0 0.0 0.278 A:P48551:0.278
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 SER A:152 D:152 36.0 0.313 H -59.0 -40.6 11.0 0.096 0.217 B:None:0.217
SER D:152 E:152 34.0 0.296 H -57.9 -40.3 NA NA NA
SER G:152 F:152 37.0 0.322 H -59.8 -40.4 NA NA NA
SER J:152 G:152 35.0 0.304 H -59.5 -39.5 NA NA NA
SER M:152 H:152 39.0 0.339 H -58.7 -39.6 NA NA NA
SER P:152 I:152 37.0 0.322 H -58.8 -41.4 NA NA NA
SER S:152 X:152 43.0 0.374 H -59.5 -40.4 NA NA NA
SER V:152 N:152 41.0 0.357 H -59.1 -39.6 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 SER A:153 A:152 39.0 0.339 H -55.8 -45.1 39.0 0.339 0.0
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 SER B:153 B:152 40.0 0.348 H -70.0 -34.6 5.0 0.043 0.305 C:P48551:0.304
4ypg 3 P01563 82.61 4e-94 X-RAY
 2015-05-06 SER C:154 C:152 28.0 0.243 H -59.4 -35.2 28.0 0.243 0.0
SER D:154 D:152 8.0 0.07 H -66.1 -36.8 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 SER A:155 A:152 34.0 0.296 H -70.8 -35.7 2.0 0.017 0.279 B:P48551:0.278
 HOH
 7.286
 OG
 O
SER C:155 C:152 63.0 0.548 H -61.2 -47.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 99.47 7e-141 SER A:176 A:176 54.0 0.47 H -63.2 -42.9
af-p01569-f1 1 P01569 84.66 3e-119 SER A:176 A:176 61.0 0.53 H -64.2 -41.3
af-p01570-f1 1 P01570 82.54 2e-115 SER A:176 A:176 46.0 0.4 H -69.6 -38.1
af-p05013-f1 1 P05013 85.19 2e-115 SER A:176 A:176 65.0 0.565 H -64.2 -44.2
af-p01568-f1 1 P01568 81.48 2e-112 SER A:176 A:176 55.0 0.478 H -70.6 -38.6
af-p05014-f1 1 P05014 80.42 6e-112 SER A:176 A:176 51.0 0.443 H -72.7 -41.2
af-p01563-f1 1 P01563 82.01 3e-104 SER A:175 A:175 37.0 0.322 H -60.0 -42.8