Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21367571 . A C CCDS6505.2:NM_006900.3:c.439Tac>Gac_NP_008831.3:p.147Y>D Homo sapiens interferon alpha 13 (IFNA13), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 TYR A:126 A:123 1.0 0.004 H -46.4 -48.0 1.0 0.004 0.0 HOH
 4.049
 N
 O
TYR C:126 C:123 1.0 0.004 H -44.8 -49.1 NA NA NA
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 TYR B:122 A:122 13.0 0.057 H -59.4 -45.1 13.0 0.057 0.0
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 TYR A:122 D:122 1.0 0.004 H -57.3 -51.7 1.0 0.004 0.0
TYR D:122 E:122 1.0 0.004 H -58.5 -49.9 NA NA NA
TYR G:122 F:122 1.0 0.004 H -56.7 -50.1 NA NA NA
TYR J:122 G:122 1.0 0.004 H -57.4 -49.9 NA NA NA
TYR M:122 H:122 0.0 0.0 H -57.8 -49.0 NA NA NA
TYR P:122 I:122 0.0 0.0 H -57.4 -49.7 NA NA NA
TYR S:122 X:122 1.0 0.004 H -56.2 -51.1 NA NA NA
TYR V:122 N:122 0.0 0.0 H -57.4 -49.8 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 TYR A:123 A:122 19.0 0.083 H -62.8 -62.0 19.0 0.083 0.0
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 TYR B:123 B:122 0.0 0.0 H -53.4 -47.5 0.0 0.0 0.0
4ypg 3 P01563 82.61 4e-94 X-RAY
 2015-05-06 TYR C:124 C:122 0.0 0.0 H -57.0 -37.8 0.0 0.0 0.0
TYR D:124 D:122 0.0 0.0 H -57.6 -38.8 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 TYR A:125 A:122 0.0 0.0 H -54.0 -50.0 0.0 0.0 0.0 HOH
 3.491
 N
 O
TYR C:125 C:122 0.0 0.0 H -55.1 -57.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 99.47 7e-141 TYR A:146 A:146 0.0 0.0 H -60.0 -49.5
af-p01569-f1 1 P01569 84.66 3e-119 TYR A:146 A:146 1.0 0.004 H -60.6 -48.0
af-p01570-f1 1 P01570 82.54 2e-115 TYR A:146 A:146 0.0 0.0 H -58.0 -48.2
af-p05013-f1 1 P05013 85.19 2e-115 TYR A:146 A:146 0.0 0.0 H -62.4 -49.7
af-p01568-f1 1 P01568 81.48 2e-112 TYR A:146 A:146 2.0 0.009 H -60.3 -48.7
af-p05014-f1 1 P05014 80.42 6e-112 TYR A:146 A:146 1.0 0.004 H -60.2 -48.4
af-p01563-f1 1 P01563 82.01 3e-104 TYR A:145 A:145 0.0 0.0 H -61.0 -48.4