Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21367882 . G A CCDS6505.2:NM_006900.3:c.128gCa>gTa_NP_008831.3:p.43A>V Homo sapiens interferon alpha 13 (IFNA13), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 ALA A:22 A:19 53.0 0.461 H -62.7 -29.2 53.0 0.461 0.0
ALA C:22 C:19 52.0 0.452 H -63.3 -27.9 NA NA NA
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 ALA B:19 A:19 50.0 0.435 H -78.5 -35.7 26.0 0.226 0.209 A:P48551:0.209
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 ALA A:19 D:19 40.0 0.348 H -63.1 -45.2 21.0 0.183 0.165 B:None:0.165
ALA D:19 E:19 41.0 0.357 H -63.8 -43.9 NA NA NA
ALA G:19 F:19 40.0 0.348 H -64.3 -46.1 NA NA NA
ALA J:19 G:19 40.0 0.348 H -63.7 -45.1 NA NA NA
ALA M:19 H:19 43.0 0.374 H -63.7 -46.4 NA NA NA
ALA P:19 I:19 41.0 0.357 H -64.2 -45.1 NA NA NA
ALA S:19 X:19 42.0 0.365 H -64.2 -45.4 NA NA NA
ALA V:19 N:19 41.0 0.357 H -64.0 -45.6 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 ALA A:20 A:19 41.0 0.357 H -77.5 -38.0 41.0 0.357 0.0
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 ALA B:20 B:19 47.0 0.409 H -59.0 -44.1 33.0 0.287 0.122 C:P48551:0.122
4ypg 3 P01563 82.61 4e-94 X-RAY
 2015-05-06 ALA C:21 C:19 43.0 0.374 H -56.4 -59.5 43.0 0.374 0.0
ALA D:21 D:19 52.0 0.452 H -57.3 -47.4 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 ALA A:22 A:19 47.0 0.409 H -59.4 -44.0 32.0 0.278 0.131 B:P48551:0.13
 HOH
 2.801
 O
 O
ALA C:22 C:19 50.0 0.435 H -62.7 -41.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 99.47 7e-141 ALA A:42 A:42 50.0 0.435 H -62.9 -40.5
af-p01569-f1 1 P01569 84.66 3e-119 ALA A:42 A:42 56.0 0.487 H -64.5 -39.9
af-p01570-f1 1 P01570 82.54 2e-115 ALA A:42 A:42 49.0 0.426 H -70.7 -37.8
af-p05013-f1 1 P05013 85.19 2e-115 ALA A:42 A:42 46.0 0.4 H -70.8 -40.9
af-p01568-f1 1 P01568 81.48 2e-112 ALA A:42 A:42 55.0 0.478 H -64.2 -40.5
af-p05014-f1 1 P05014 80.42 6e-112 ALA A:42 A:42 57.0 0.496 H -65.4 -39.9
af-p01563-f1 1 P01563 82.01 3e-104 ALA A:42 A:42 44.0 0.383 H -71.7 -39.7