Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21384973 . T A CCDS6506.1:NM_000605.3:c.356gAa>gTa_NP_000596.2:p.119E>V Homo sapiens interferon alpha 2 (IFNA2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 99.39 7e-123 NMR
 2012-12-05 GLU A:97 A:96 61.0 0.321 H -56.2 -62.7 61.0 0.321 0.0
2lag 2 P01563 99.39 8e-123 NMR
 2011-08-17 GLU B:96 A:96 57.0 0.3 H -68.9 -15.1 57.0 0.3 0.0
4z5r 1 P01563 99.39 8e-123 X-RAY
 2015-07-08 GLU A:96 D:96 80.0 0.421 H -60.3 -45.4 80.0 0.421 0.0
GLU D:96 E:96 81.0 0.426 H -60.1 -46.4 NA NA NA
GLU G:96 F:96 80.0 0.421 H -61.0 -45.1 NA NA NA
GLU J:96 G:96 82.0 0.432 H -62.1 -45.0 NA NA NA
GLU M:96 H:96 82.0 0.432 H -61.3 -45.0 NA NA NA
GLU P:96 I:96 80.0 0.421 H -62.9 -43.0 NA NA NA
GLU S:96 X:96 81.0 0.426 H -61.8 -44.3 NA NA NA
GLU V:96 N:96 82.0 0.432 H -62.0 -45.1 NA NA NA
3se3 2 Q86UP4 98.18 8e-121 X-RAY
 2011-08-31 GLU B:97 B:96 111.0 0.584 H -59.4 -58.7 36.0 0.189 0.395 A:P17181:0.395
3s9d 1 P01563 98.18 4e-120 X-RAY
 2011-08-31 GLU A:99 A:96 161.0 0.847 H -57.8 -43.4 161.0 0.847 0.0 HOH
 2.657
 OE2
 O
GLU C:99 C:96 164.0 0.863 H -52.0 -42.2 NA NA NA
4ypg 3 P01563 98.14 1e-118 X-RAY
 2015-05-06 GLU C:98 C:96 95.0 0.5 H -66.4 -29.8 1.0 0.005 0.495 B:None:0.374
A:Q6PJF2:0.295
 NI
HOH
 7.684
7.581
 C
OE1
 NI
O
GLU D:98 D:96 90.0 0.474 H -63.0 -30.7 NA NA NA
6jhd 1 P32881 83.13 9e-98 NMR
 2020-02-19 GLU A:97 A:97 102.0 0.537 H -55.5 -35.7 102.0 0.537 0.0
3ux9 1 P01562 82.25 1e-97 X-RAY
 2012-02-29 GLU A:100 A:97 91.0 0.479 H -73.5 -31.2 91.0 0.479 0.0
GLU C:100 C:97 111.0 0.584 H -78.5 -36.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01563-f1 1 P01563 99.47 3e-140 GLU A:119 A:119 95.0 0.5 H -60.7 -40.3
af-p01569-f1 1 P01569 83.6 4e-116 GLU A:120 A:120 75.0 0.395 H -62.9 -39.9
af-p05013-f1 1 P05013 85.71 5e-116 GLU A:120 A:120 87.0 0.458 H -62.0 -38.0
af-p01570-f1 1 P01570 82.01 2e-114 GLU A:120 A:120 101.0 0.532 H -62.7 -43.6
af-p05014-f1 1 P05014 81.48 4e-112 GLU A:120 A:120 103.0 0.542 H -61.5 -40.4
af-p05015-f1 1 P05015 80.95 1e-110 GLU A:120 A:120 110.0 0.579 H -60.5 -40.0
af-p01571-f1 1 P01571 80.42 1e-110 GLU A:120 A:120 98.0 0.516 H -62.3 -43.8
af-p01562-f1 1 P01562 82.01 3e-110 GLU A:120 A:120 84.0 0.442 H -64.3 -38.9
af-p01568-f1 1 P01568 81.48 4e-110 GLU A:120 A:120 109.0 0.574 H -62.4 -44.7
af-p01566-f1 1 P01566 80.42 8e-110 GLU A:120 A:120 102.0 0.537 H -61.9 -40.1
af-p32881-f1 1 P32881 82.01 4e-109 GLU A:120 A:120 87.0 0.458 H -59.4 -42.1