Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21385027 . T A CCDS6506.1:NM_000605.3:c.302gAg>gTg_NP_000596.2:p.101E>V Homo sapiens interferon alpha 2 (IFNA2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 99.39 7e-123 NMR
 2012-12-05 GLU A:79 A:78 129.0 0.679 H -71.6 -45.0 129.0 0.679 0.0
2lag 2 P01563 99.39 8e-123 NMR
 2011-08-17 GLU B:78 A:78 136.0 0.716 H -49.2 -41.0 136.0 0.716 0.0
4z5r 1 P01563 99.39 8e-123 X-RAY
 2015-07-08 GLU A:78 D:78 136.0 0.716 H -55.4 -40.2 136.0 0.716 0.0
GLU D:78 E:78 137.0 0.721 H -56.1 -40.9 NA NA NA
GLU G:78 F:78 138.0 0.726 H -54.6 -41.2 NA NA NA
GLU J:78 G:78 134.0 0.705 H -54.2 -41.6 NA NA NA
GLU M:78 H:78 135.0 0.711 H -56.1 -39.9 NA NA NA
GLU P:78 I:78 134.0 0.705 H -55.3 -40.6 NA NA NA
GLU S:78 X:78 135.0 0.711 H -55.4 -40.6 NA NA NA
GLU V:78 N:78 136.0 0.716 H -55.9 -40.6 NA NA NA
3se3 2 Q86UP4 98.18 8e-121 X-RAY
 2011-08-31 GLU B:79 B:78 143.0 0.753 H -62.9 -34.9 143.0 0.753 0.0
3s9d 1 P01563 98.18 4e-120 X-RAY
 2011-08-31 GLU A:81 A:78 150.0 0.789 H -65.2 -35.0 150.0 0.789 0.0 HOH
 2.973
 N
 O
GLU C:81 C:78 150.0 0.789 H -64.5 -39.2 NA NA NA
4ypg 3 P01563 98.14 1e-118 X-RAY
 2015-05-06 GLU C:80 C:78 160.0 0.842 H -52.0 -45.9 160.0 0.842 0.0 HOH
 8.597
 O
 O
GLU D:80 D:78 159.0 0.837 H -46.0 -55.0 NA NA NA
6jhd 1 P32881 83.13 9e-98 NMR
 2020-02-19 GLU A:79 A:79 151.0 0.795 H -54.1 -30.0 151.0 0.795 0.0
3ux9 1 P01562 82.25 1e-97 X-RAY
 2012-02-29 GLU A:82 A:79 174.0 0.916 H -53.5 -62.7 174.0 0.916 0.0
GLU C:82 C:79 176.0 0.926 H -53.9 -66.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01563-f1 1 P01563 99.47 3e-140 GLU A:101 A:101 168.0 0.884 H -62.2 -36.8
af-p01569-f1 1 P01569 83.6 4e-116 GLU A:102 A:102 163.0 0.858 H -59.8 -39.6
af-p05013-f1 1 P05013 85.71 5e-116 GLU A:102 A:102 164.0 0.863 H -57.7 -38.6
af-p01570-f1 1 P01570 82.01 2e-114 GLU A:102 A:102 159.0 0.837 H -61.5 -38.2
af-p05014-f1 1 P05014 81.48 4e-112 GLN A:102 A:102 93.0 0.517 H -50.9 -42.2
af-p05015-f1 1 P05015 80.95 1e-110 GLU A:102 A:102 166.0 0.874 H -58.6 -40.9
af-p01571-f1 1 P01571 80.42 1e-110 GLN A:102 A:102 96.0 0.533 H -52.2 -43.3
af-p01562-f1 1 P01562 82.01 3e-110 GLU A:102 A:102 161.0 0.847 H -61.8 -44.7
af-p01568-f1 1 P01568 81.48 4e-110 GLN A:102 A:102 94.0 0.522 H -51.7 -43.2
af-p01566-f1 1 P01566 80.42 8e-110 GLN A:102 A:102 95.0 0.528 H -52.1 -42.3
af-p32881-f1 1 P32881 82.01 4e-109 GLU A:102 A:102 128.0 0.674 H -57.4 -40.1