Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21385159 . T A CCDS6506.1:NM_000605.3:c.170cAt>cTt_NP_000596.2:p.57H>L Homo sapiens interferon alpha 2 (IFNA2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 99.39 7e-123 NMR
 2012-12-05 HIS A:35 A:34 141.0 0.723 S -69.9 106.4 141.0 0.723 0.0
2lag 2 P01563 99.39 8e-123 NMR
 2011-08-17 HIS B:34 A:34 125.0 0.641 -161.8 169.2 109.0 0.559 0.082 A:P48551:0.082
4z5r 1 P01563 99.39 8e-123 X-RAY
 2015-07-08 HIS A:34 D:34 100.0 0.513 -156.7 137.8 45.0 0.231 0.282 C:None:0.282
HIS D:34 E:34 100.0 0.513 -157.5 139.4 NA NA NA
HIS G:34 F:34 103.0 0.528 -157.1 139.0 NA NA NA
HIS J:34 G:34 100.0 0.513 -158.2 136.7 NA NA NA
HIS M:34 H:34 101.0 0.518 -158.0 138.9 NA NA NA
HIS P:34 I:34 100.0 0.513 -157.0 139.5 NA NA NA
HIS S:34 X:34 102.0 0.523 -155.7 138.5 NA NA NA
HIS V:34 N:34 100.0 0.513 -158.3 138.7 NA NA NA
3se3 2 Q86UP4 98.18 8e-121 X-RAY
 2011-08-31 HIS B:35 B:34 113.0 0.579 -162.6 136.4 93.0 0.477 0.102 C:P48551:0.103
3s9d 1 P01563 98.18 4e-120 X-RAY
 2011-08-31 HIS A:37 A:34 102.0 0.523 -157.5 133.8 85.0 0.436 0.087 B:P48551:0.087
 HOH
 2.792
 O
 O
HIS C:37 C:34 111.0 0.569 -173.6 132.5 NA NA NA
4ypg 3 P01563 98.14 1e-118 X-RAY
 2015-05-06 HIS C:36 C:34 119.0 0.61 -103.5 165.3 119.0 0.61 0.0 HOH
 2.526
 NE2
 O
HIS D:36 D:34 128.0 0.656 -91.3 164.9 NA NA NA
6jhd 1 P32881 83.13 9e-98 NMR
 2020-02-19 HIS A:34 A:34 117.0 0.6 -130.0 172.0 117.0 0.6 0.0
3ux9 1 P01562 82.25 1e-97 X-RAY
 2012-02-29 HIS A:37 A:34 95.0 0.487 -146.4 139.2 51.0 0.262 0.225 B:None:0.226
 HOH
 9.131
 O
 O
HIS C:37 C:34 95.0 0.487 -147.6 140.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01563-f1 1 P01563 99.47 3e-140 HIS A:57 A:57 95.0 0.487 -145.0 138.6
af-p01569-f1 1 P01569 83.6 4e-116 HIS A:57 A:57 95.0 0.487 -144.1 140.0
af-p05013-f1 1 P05013 85.71 5e-116 HIS A:57 A:57 93.0 0.477 -142.6 140.2
af-p01570-f1 1 P01570 82.01 2e-114 HIS A:57 A:57 96.0 0.492 -143.7 141.0
af-p05014-f1 1 P05014 81.48 4e-112 HIS A:57 A:57 91.0 0.467 -143.5 139.3
af-p05015-f1 1 P05015 80.95 1e-110 TYR A:57 A:57 128.0 0.557 -147.1 139.4
af-p01571-f1 1 P01571 80.42 1e-110 HIS A:57 A:57 86.0 0.441 -143.0 141.1
af-p01562-f1 1 P01562 82.01 3e-110 HIS A:57 A:57 88.0 0.451 -144.1 138.3
af-p01568-f1 1 P01568 81.48 4e-110 HIS A:57 A:57 93.0 0.477 -144.1 142.3
af-p01566-f1 1 P01566 80.42 8e-110 HIS A:57 A:57 85.0 0.436 -140.4 138.9
af-p32881-f1 1 P32881 82.01 4e-109 HIS A:57 A:57 90.0 0.462 -143.9 141.3