Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21385216 . A C CCDS6506.1:NM_000605.3:c.113tTg>tGg_NP_000596.2:p.38L>W Homo sapiens interferon alpha 2 (IFNA2), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2lms 1 P01563 99.39 7e-123 NMR
 2012-12-05 LEU A:16 A:15 50.0 0.294 H -56.3 -62.7 50.0 0.294 0.0
2lag 2 P01563 99.39 8e-123 NMR
 2011-08-17 LEU B:15 A:15 73.0 0.429 H -63.3 -30.4 6.0 0.035 0.394 A:P48551:0.394
4z5r 1 P01563 99.39 8e-123 X-RAY
 2015-07-08 LEU A:15 D:15 15.0 0.088 H -68.5 -40.0 13.0 0.076 0.012 B:None:0.012
LEU D:15 E:15 13.0 0.076 H -68.8 -40.8 NA NA NA
LEU G:15 F:15 16.0 0.094 H -69.0 -39.8 NA NA NA
LEU J:15 G:15 13.0 0.076 H -68.4 -41.1 NA NA NA
LEU M:15 H:15 15.0 0.088 H -67.4 -41.1 NA NA NA
LEU P:15 I:15 19.0 0.112 H -69.9 -39.1 NA NA NA
LEU S:15 X:15 17.0 0.1 H -67.7 -41.2 NA NA NA
LEU V:15 N:15 16.0 0.094 H -68.1 -40.6 NA NA NA
3se3 2 Q86UP4 98.18 8e-121 X-RAY
 2011-08-31 LEU B:16 B:15 42.0 0.247 H -62.6 -41.3 14.0 0.082 0.165 C:P48551:0.165
3s9d 1 P01563 98.18 4e-120 X-RAY
 2011-08-31 LEU A:18 A:15 42.0 0.247 H -64.0 -39.4 13.0 0.076 0.171 B:P48551:0.171
 HOH
 6.590
 O
 O
LEU C:18 C:15 37.0 0.218 H -66.4 -37.8 NA NA NA
4ypg 3 P01563 98.14 1e-118 X-RAY
 2015-05-06 LEU C:17 C:15 16.0 0.094 H -59.1 -34.4 16.0 0.094 0.0
LEU D:17 D:15 32.0 0.188 H -61.8 -48.6 NA NA NA
6jhd 1 P32881 83.13 9e-98 NMR
 2020-02-19 LEU A:15 A:15 39.0 0.229 H -73.4 -31.4 39.0 0.229 0.0
3ux9 1 P01562 82.25 1e-97 X-RAY
 2012-02-29 LEU A:18 A:15 41.0 0.241 H -55.3 -44.5 41.0 0.241 0.0
LEU C:18 C:15 41.0 0.241 H -53.3 -42.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01563-f1 1 P01563 99.47 3e-140 LEU A:38 A:38 36.0 0.212 H -64.9 -39.0
af-p01569-f1 1 P01569 83.6 4e-116 LEU A:38 A:38 37.0 0.218 H -63.2 -40.6
af-p05013-f1 1 P05013 85.71 5e-116 MET A:38 A:38 49.0 0.265 H -62.2 -40.3
af-p01570-f1 1 P01570 82.01 2e-114 LEU A:38 A:38 41.0 0.241 H -65.5 -37.9
af-p05014-f1 1 P05014 81.48 4e-112 LEU A:38 A:38 35.0 0.206 H -62.4 -41.4
af-p05015-f1 1 P05015 80.95 1e-110 LEU A:38 A:38 37.0 0.218 H -63.6 -40.1
af-p01571-f1 1 P01571 80.42 1e-110 LEU A:38 A:38 35.0 0.206 H -62.0 -40.9
af-p01562-f1 1 P01562 82.01 3e-110 LEU A:38 A:38 32.0 0.188 H -63.5 -39.6
af-p01568-f1 1 P01568 81.48 4e-110 LEU A:38 A:38 32.0 0.188 H -63.4 -40.0
af-p01566-f1 1 P01566 80.42 8e-110 LEU A:38 A:38 36.0 0.212 H -62.7 -40.8
af-p32881-f1 1 P32881 82.01 4e-109 LEU A:38 A:38 36.0 0.212 H -62.4 -39.6