Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21409300 . C A CCDS6507.1:NM_002170.3:c.125gCa>gAa_NP_002161.2:p.42A>E Homo sapiens interferon alpha 8 (IFNA8), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6jhd 1 P32881 100.0 4e-122 NMR
 2020-02-19 ALA A:19 A:19 46.0 0.4 H -63.3 -31.6 46.0 0.4 0.0
2lms 1 P01563 82.53 3e-97 NMR
 2012-12-05 ALA A:20 A:19 41.0 0.357 H -77.5 -38.0 41.0 0.357 0.0
2lag 2 P01563 82.53 3e-97 NMR
 2011-08-17 ALA B:19 A:19 50.0 0.435 H -78.5 -35.7 26.0 0.226 0.209 A:P48551:0.209
4z5r 1 P01563 82.53 3e-97 X-RAY
 2015-07-08 ALA A:19 D:19 40.0 0.348 H -63.1 -45.2 21.0 0.183 0.165 B:None:0.165
ALA D:19 E:19 41.0 0.357 H -63.8 -43.9 NA NA NA
ALA G:19 F:19 40.0 0.348 H -64.3 -46.1 NA NA NA
ALA J:19 G:19 40.0 0.348 H -63.7 -45.1 NA NA NA
ALA M:19 H:19 43.0 0.374 H -63.7 -46.4 NA NA NA
ALA P:19 I:19 41.0 0.357 H -64.2 -45.1 NA NA NA
ALA S:19 X:19 42.0 0.365 H -64.2 -45.4 NA NA NA
ALA V:19 N:19 41.0 0.357 H -64.0 -45.6 NA NA NA
3se3 2 Q86UP4 81.33 4e-95 X-RAY
 2011-08-31 ALA B:20 B:19 47.0 0.409 H -59.0 -44.1 33.0 0.287 0.122 C:P48551:0.122
3s9d 1 P01563 81.33 1e-94 X-RAY
 2011-08-31 ALA A:22 A:19 47.0 0.409 H -59.4 -44.0 32.0 0.278 0.131 B:P48551:0.13
 HOH
 2.801
 O
 O
ALA C:22 C:19 50.0 0.435 H -62.7 -41.7 NA NA NA
4ypg 3 P01563 83.12 2e-94 X-RAY
 2015-05-06 ALA C:21 C:19 43.0 0.374 H -56.4 -59.5 43.0 0.374 0.0
ALA D:21 D:19 52.0 0.452 H -57.3 -47.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p32881-f1 1 P32881 100.0 2e-139 ALA A:42 A:42 44.0 0.383 H -68.4 -38.8
af-p01569-f1 1 P01569 82.01 3e-112 ALA A:42 A:42 56.0 0.487 H -64.5 -39.9
af-p01568-f1 1 P01568 81.48 9e-112 ALA A:42 A:42 55.0 0.478 H -64.2 -40.5
af-p01570-f1 1 P01570 80.95 1e-111 ALA A:42 A:42 49.0 0.426 H -70.7 -37.8
af-p05014-f1 1 P05014 81.48 3e-111 ALA A:42 A:42 57.0 0.496 H -65.4 -39.9
af-p01566-f1 1 P01566 80.42 6e-111 GLY A:42 A:42 39.0 0.52 H -61.4 -42.2
af-p05015-f1 1 P05015 82.01 2e-109 ALA A:42 A:42 54.0 0.47 H -65.2 -40.6
af-p05013-f1 1 P05013 80.95 3e-107 ALA A:42 A:42 46.0 0.4 H -70.8 -40.9
af-p01563-f1 1 P01563 81.48 6e-103 ALA A:42 A:42 44.0 0.383 H -71.7 -39.7