Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21440693 . C A CCDS6508.1:NM_024013.2:c.187Cag>Aag_NP_076918.1:p.63Q>K Homo sapiens interferon alpha 1 (IFNA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 GLN A:43 A:40 75.0 0.417 G -51.4 -35.8 38.0 0.211 0.206 B:None:0.206
 HOH
 3.553
 OE1
 O
GLN C:43 C:40 92.0 0.511 G -49.7 -33.2 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 GLN A:41 A:40 107.0 0.594 H -58.0 -19.6 107.0 0.594 0.0
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 GLN B:40 A:40 88.0 0.489 -87.3 -15.3 88.0 0.489 0.0
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 GLN A:40 D:40 108.0 0.6 G -70.8 -33.7 50.0 0.278 0.322 B:None:0.322
GLN D:40 E:40 105.0 0.583 G -70.5 -34.7 NA NA NA
GLN G:40 F:40 109.0 0.606 G -70.7 -35.6 NA NA NA
GLN J:40 G:40 108.0 0.6 G -71.7 -34.1 NA NA NA
GLN M:40 H:40 109.0 0.606 G -70.3 -35.3 NA NA NA
GLN P:40 I:40 108.0 0.6 G -71.0 -34.1 NA NA NA
GLN S:40 X:40 110.0 0.611 G -70.2 -36.5 NA NA NA
GLN V:40 N:40 97.0 0.539 G -69.0 -36.1 NA NA NA
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 GLN B:41 B:40 88.0 0.489 G -68.5 -17.4 88.0 0.489 0.0
4ypg 3 P01563 82.61 5e-94 X-RAY
 2015-05-06 GLN C:42 C:40 118.0 0.656 G -64.1 -26.7 118.0 0.656 0.0
GLN D:42 D:40 96.0 0.533 G -70.8 -17.9 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 GLN A:43 A:40 87.0 0.483 G -65.7 -18.0 87.0 0.483 0.0 HOH
 2.622
 OE1
 O
GLN C:43 C:40 110.0 NA -42.7 360.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 100.0 1e-141 GLN A:63 A:63 77.0 0.428 G -59.2 -34.3
af-p01569-f1 1 P01569 84.13 2e-118 GLN A:63 A:63 121.0 0.672 G -56.5 -33.6
af-p01570-f1 1 P01570 82.01 9e-115 GLN A:63 A:63 82.0 0.456 -69.2 -33.6
af-p05013-f1 1 P05013 84.66 1e-114 GLN A:63 A:63 79.0 0.439 H -61.8 -38.9
af-p01568-f1 1 P01568 80.95 1e-111 GLN A:63 A:63 66.0 0.367 T -63.6 -35.4
af-p01563-f1 1 P01563 81.48 3e-104 GLN A:63 A:63 92.0 0.511 G -64.0 -31.1