Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21440786 . A C CCDS6508.1:NM_024013.2:c.280Aaa>Caa_NP_076918.1:p.94K>Q Homo sapiens interferon alpha 1 (IFNA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 LYS A:74 A:71 180.0 0.9 H -67.2 -46.7 180.0 0.9 0.0
LYS C:74 C:71 182.0 0.91 H -68.1 -45.1 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 LYS A:71 A:70 178.0 0.89 H -81.7 -24.3 178.0 0.89 0.0
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 LYS B:70 A:70 183.0 0.915 H -64.7 -26.0 183.0 0.915 0.0
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 LYS A:70 D:70 170.0 0.85 H -64.4 -23.2 170.0 0.85 0.0
LYS D:70 E:70 172.0 0.86 H -66.3 -22.8 NA NA NA
LYS G:70 F:70 173.0 0.865 H -65.8 -23.3 NA NA NA
LYS J:70 G:70 174.0 0.87 H -65.3 -24.5 NA NA NA
LYS M:70 H:70 176.0 0.88 H -65.2 -23.5 NA NA NA
LYS P:70 I:70 175.0 0.875 H -66.4 -22.7 NA NA NA
LYS S:70 X:70 172.0 0.86 H -67.1 -23.0 NA NA NA
LYS V:70 N:70 169.0 0.845 H -66.7 -22.6 NA NA NA
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 LYS B:71 B:70 190.0 0.95 H -58.6 -30.2 165.0 0.825 0.125 A:P17181:0.125
4ypg 3 P01563 82.61 5e-94 X-RAY
 2015-05-06 LYS C:72 C:70 192.0 0.96 H -56.5 -35.9 192.0 0.96 0.0
LYS D:72 D:70 198.0 0.99 H -52.5 -33.8 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 LYS A:73 A:70 165.0 0.825 H -61.0 -28.6 165.0 0.825 0.0 HOH
 3.096
 N
 O
LYS C:73 C:70 80.0 NA H -71.9 -34.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 100.0 1e-141 LYS A:94 A:94 182.0 0.91 H -59.1 -36.3
af-p01569-f1 1 P01569 84.13 2e-118 LYS A:94 A:94 187.0 0.935 H -59.3 -38.8
af-p01570-f1 1 P01570 82.01 9e-115 LYS A:94 A:94 189.0 0.945 H -55.6 -37.0
af-p05013-f1 1 P05013 84.66 1e-114 LYS A:94 A:94 170.0 0.85 H -59.0 -41.2
af-p01568-f1 1 P01568 80.95 1e-111 LYS A:94 A:94 184.0 0.92 H -62.7 -38.7
af-p01563-f1 1 P01563 81.48 3e-104 LYS A:93 A:93 186.0 0.93 H -60.7 -38.4