Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr9 21440948 . C A CCDS6508.1:NM_024013.2:c.442Cga>Aga_NP_076918.1:p.148R>R Homo sapiens interferon alpha 1 (IFNA1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ux9 1 P01562 98.82 3e-124 X-RAY
 2012-02-29 ARG A:128 A:125 129.0 0.573 H -88.0 -27.1 129.0 0.573 0.0 HOH
 8.291
 N
 O
ARG C:128 C:125 135.0 0.6 H -73.0 -45.0 NA NA NA
2lms 1 P01563 82.53 1e-96 NMR
 2012-12-05 GLN A:125 A:124 88.0 0.489 H -57.6 -59.5 88.0 0.489 0.0
2lag 2 P01563 82.53 1e-96 NMR
 2011-08-17 GLN B:124 A:124 90.0 0.5 H -66.2 -31.9 90.0 0.5 0.0
4z5r 1 P01563 82.53 1e-96 X-RAY
 2015-07-08 GLN A:124 D:124 117.0 0.65 H -62.1 -47.3 117.0 0.65 0.0
GLN D:124 E:124 118.0 0.656 H -60.3 -48.0 NA NA NA
GLN G:124 F:124 115.0 0.639 H -62.0 -47.1 NA NA NA
GLN J:124 G:124 117.0 0.65 H -59.9 -47.2 NA NA NA
GLN M:124 H:124 118.0 0.656 H -60.6 -49.8 NA NA NA
GLN P:124 I:124 116.0 0.644 H -61.5 -50.0 NA NA NA
GLN S:124 X:124 116.0 0.644 H -61.0 -48.0 NA NA NA
GLN V:124 N:124 117.0 0.65 H -60.9 -48.1 NA NA NA
3se3 2 Q86UP4 81.33 1e-94 X-RAY
 2011-08-31 GLN B:125 B:124 111.0 0.617 H -64.3 -41.8 36.0 0.2 0.417 A:P17181:0.417
4ypg 3 P01563 82.61 5e-94 X-RAY
 2015-05-06 GLN C:126 C:124 141.0 0.783 H -62.0 -30.7 141.0 0.783 0.0 HOH
 7.029
 OE1
 O
GLN D:126 D:124 131.0 0.728 H -61.1 -42.4 NA NA NA
3s9d 1 P01563 81.33 1e-93 X-RAY
 2011-08-31 GLN A:127 A:124 116.0 0.644 H -65.7 -41.6 116.0 0.644 0.0 HOH
 3.113
 O
 O
GLN C:127 C:124 134.0 0.744 H -66.4 -45.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01562-f1 1 P01562 100.0 1e-141 ARG A:148 A:148 197.0 0.876 H -61.7 -39.5
af-p01569-f1 1 P01569 84.13 2e-118 GLN A:148 A:148 126.0 0.7 H -59.2 -40.7
af-p01570-f1 1 P01570 82.01 9e-115 GLN A:148 A:148 117.0 0.65 H -61.8 -45.1
af-p05013-f1 1 P05013 84.66 1e-114 GLN A:148 A:148 123.0 0.683 H -59.8 -40.9
af-p01568-f1 1 P01568 80.95 1e-111 GLN A:148 A:148 113.0 0.628 H -59.6 -42.8
af-p01563-f1 1 P01563 81.48 3e-104 GLN A:147 A:147 126.0 0.7 H -60.6 -42.8